LOCUS BC007102 1155 bp mRNA linear HUM 01-SEP-2006
DEFINITION Homo sapiens RCD1 required for cell differentiation1 homolog (S.
pombe), mRNA (cDNA clone IMAGE:4281152), partial cds.
ACCESSION BC007102
VERSION BC007102.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1155)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1155)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (30-APR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 21 Row: h Column: 2
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 4885578.
FEATURES Location/Qualifiers
source 1..1155
/db_xref="H-InvDB:HIT000033050"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4281152"
/tissue_type="Brain, primitive neuroectodermal"
/clone_lib="NIH_MGC_56"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene <1..1155
/gene="RQCD1"
/gene_synonym="CNOT9"
/gene_synonym="RCD1"
/gene_synonym="RCD1+"
/db_xref="GeneID:9125"
/db_xref="HGNC:HGNC:10445"
CDS <1..859
/gene="RQCD1"
/gene_synonym="CNOT9"
/gene_synonym="RCD1"
/gene_synonym="RCD1+"
/codon_start=2
/product="RQCD1 protein"
/protein_id="AAH07102.2"
/db_xref="GeneID:9125"
/db_xref="HGNC:HGNC:10445"
/translation="FFRCRGAEGGTRVGRVRLWKRAAAAHNMHSLATAAPVPTTLAQV
DREKIYQWINELSSPETRENALLELSKKRESVPDLAPMLWHSFGTIAALLQEIVNIYP
SINPPTLTAHQSNRVCNALALLQCVASHPETRSAFLAAHIPLFLYPFLHTVSKTRPFE
YLRLTSLGVTGALVKTDEQEVINFLLTTEIIPLCLRIMESGSELSKTVATFILQKILL
DDTGLAYICQTYERFSHVAMILGKMVLQLSKEPSARLLKHVVRCYLRLSDNPRFSDLT
FCWSSFQRK"
BASE COUNT 340 a 242 c 228 g 345 t
ORIGIN
1 gtttttccgc tgcaggggtg ctgaaggggg gacgcgggtc ggacgcgtcc ggctgtggaa
61 gagagcggcg gccgctcaca acatgcacag cctggcgacg gctgcgcctg tgcctactac
121 actggcacaa gtggatagag aaaagatcta tcagtggatc aatgagctgt ccagtcctga
181 gactagggaa aatgctttgc tggagctaag taagaagcga gaatctgttc ctgaccttgc
241 acccatgctg tggcattcat ttggtactat tgcagcactt ttacaggaaa ttgtaaatat
301 ttatccatct atcaacccac ccaccttgac agcacaccag tctaacagag tttgcaatgc
361 tctggcatta ctgcaatgtg tagcatcaca tccagaaacc aggtcagcgt ttctcgcagc
421 acacatccca ctttttttgt accccttttt gcacactgtc agcaaaacac gtccctttga
481 gtatctccgg ctcaccagcc ttggagttac tggggccctg gtgaaaacag atgaacaaga
541 agtaatcaac tttttattaa caacagaaat tatcccttta tgtttgcgaa ttatggaatc
601 tggaagtgaa ctttctaaaa cagttgccac attcatcctc cagaagatct tgttagatga
661 cactggtttg gcttatatat gtcagacgta tgagcgtttc tcccatgttg ccatgatctt
721 gggtaagatg gtcctgcagc tatccaaaga gccttctgcc cgtctgctga agcatgtagt
781 gagatgttac cttcgacttt cagataaccc caggttttca gatttgactt tctgctggtc
841 atcttttcaa agaaaatgaa acgtttaaaa gttcatctga taatactgct accatagttt
901 tgttttcact gctcatctct tattaaggtt tttaaccata aaactgaagc aatttctgta
961 aagacacaaa ttgataactt agtatagaat taaaattcat taagttatca taagtttgat
1021 gttatccttg ttaatgtact gatttttgaa ttattttatt tgccataatc catatatttc
1081 taacatgagt attttgacag tatttaataa atcagaaagc tgtctaaaaa aaaaaaaaaa
1141 aaaaaaaaaa aaaaa
//