LOCUS BC007071 1795 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens centromere protein L, mRNA (cDNA clone MGC:12534
IMAGE:3682908), complete cds.
ACCESSION BC007071
VERSION BC007071.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1795)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1795)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (30-APR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 16 Row: c Column: 7
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 58743362.
FEATURES Location/Qualifiers
source 1..1795
/db_xref="H-InvDB:HIT000086734"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:12534 IMAGE:3682908"
/tissue_type="Bladder, carcinoma"
/clone_lib="NIH_MGC_53"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..1795
/gene="CENPL"
/gene_synonym="CENP-L"
/gene_synonym="dJ383J4.3"
/gene_synonym="FLJ31044"
/gene_synonym="RP3-383J4.1"
/db_xref="GeneID:91687"
/db_xref="HGNC:HGNC:17879"
CDS 139..1173
/gene="CENPL"
/gene_synonym="CENP-L"
/gene_synonym="dJ383J4.3"
/gene_synonym="FLJ31044"
/gene_synonym="RP3-383J4.1"
/codon_start=1
/product="centromere protein L"
/protein_id="AAH07071.1"
/db_xref="GeneID:91687"
/db_xref="HGNC:HGNC:17879"
/translation="MDSYSAPESTPSASSRPEDYFIGATPLQKRLESVRKQSSFILTP
PRRKIPQCSQLQEDVDPQKVAFLLHKQWTLYSLTPLYKFSYSNLKEYSRLLNAFIVAE
KQKGLAVEVGEDFNIKVIFSTLLGMKGTQRDPEAFLVQIVSKSQLPSENREGKVLWTG
WFCCVFGDSLLETVSEDFTCLPLFLANGAESNTAIIGTWFQKTFDCYFSPLAINAFNL
SWMAAMWTACKMDHYVATTEFLWSVPCSPQSLDISFAIHPEDAKALWDSVHKTPGEVT
QEEVDLFMDCLYSHFHRHFKIHLSATRLVRVSTSVASAHTDGKIKILCHKYLIGVLAY
LTELAIFQIE"
BASE COUNT 540 a 368 c 389 g 498 t
ORIGIN
1 gcccgccccg cgtctgaggg agcggaggtc ttcctggggg atttcagtct ccacatagtt
61 ttggagccgg acttttgaag aatgattcgt gaatccggaa tgggtgacag cgtcatcacg
121 gcattttatt gacagaccat ggattcttac agtgcaccag agtcaactcc tagtgcatcc
181 tcaagacctg aagattactt tataggtgcc actcctctgc agaaacgatt agaatcggtc
241 aggaagcaga gttcatttat cctgactcca cctcgaagga aaattcccca gtgttcgcag
301 ttgcaggaag atgttgaccc tcaaaaggtt gcattccttc tgcataaaca gtggacttta
361 tatagtttaa ctcccttata taaattctcc tatagtaatc tcaaagagta ttctagactt
421 ctcaatgctt ttattgttgc tgaaaagcaa aaaggacttg ctgtggaagt gggagaagac
481 ttcaacatca aagtgatttt ttctactctc ctaggaatga aaggaacaca aagggacccg
541 gaagcatttc ttgtccagat tgtgtcaaaa tctcaattgc catctgagaa tagagaaggt
601 aaagtgctgt ggactggctg gttctgctgt gtatttggag acagtcttct ggagactgtt
661 tcagaagatt tcacctgtct gcccttattc cttgcaaatg gagcagagtc taacacagca
721 ataattggaa cttggtttca gaaaaccttt gactgttatt tcagtccttt agcaatcaat
781 gcatttaatc tttcctggat ggctgccatg tggactgcat gcaaaatgga ccattatgtg
841 gctactactg aatttctttg gtctgtaccc tgtagccctc aaagtctgga catttctttc
901 gcaatacatc cagaggatgc aaaagctcta tgggacagtg tccacaaaac acctggggag
961 gttacccagg aagaagttga cctattcatg gattgccttt attcacattt ccatagacat
1021 ttcaaaattc atttatcagc cacaagatta gttcgtgttt caacatctgt agcttcagca
1081 catactgatg gaaaaataaa gattctgtgt cataaatacc ttattggagt gttagcatat
1141 ttgacagaac tggcaatttt tcaaattgag tgaagcctta tgtggactat aagttataga
1201 ttatatactc ttattgataa cttgcctaat tgctatgctg aaagagactg caggagaaat
1261 aggcatctat ctctgcatct gttttcccca ccatgccttt ggagttgcca agatggaagc
1321 caagaaggat ctagaagaac aaagaatatg gtagtagatg agccacagcc aggtgcccat
1381 gtactaatca tgataacctg acatgccatt ctcaaaatgc tgagttgtta atttcttgtc
1441 atctttaaat atatatatat aggctgggct tggtggctca cacctgtaat tccagcactt
1501 tgggaggctg aggtgggtgg atcatttgag gccaggaatt caagaccagc ctggccaaca
1561 tggtgaaacc ccttctctac tgaaaataca ataattagct gggcgtggtg gcacatgcct
1621 atgatcccag ctactgggga ggctgaggca ggagaatcgt tttaacccag aagacaggct
1681 gcagtgagcc aagactgcac cactgcactc cagcctgggc aacaaagtga gactctgcct
1741 caaaaaataa aaaagaaata aaacgaaaaa aaaaaaaaaa aaaaaaaaaa aaaaa
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