LOCUS BC007014 2081 bp mRNA linear HUM 17-NOV-2006
DEFINITION Homo sapiens tumor necrosis factor, alpha-induced protein 8, mRNA
(cDNA clone MGC:12346 IMAGE:3930240), complete cds.
ACCESSION BC007014
VERSION BC007014.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2081)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2081)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (30-APR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 16 Row: b Column: 7.
FEATURES Location/Qualifiers
source 1..2081
/db_xref="H-InvDB:HIT000032987"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:12346 IMAGE:3930240"
/tissue_type="Brain, primitive neuroectodermal"
/clone_lib="NIH_MGC_56"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..2081
/gene="TNFAIP8"
/gene_synonym="GG2-1"
/gene_synonym="MDC-3.13"
/gene_synonym="SCC-S2"
/db_xref="GeneID:25816"
/db_xref="HGNC:HGNC:17260"
CDS 237..833
/gene="TNFAIP8"
/gene_synonym="GG2-1"
/gene_synonym="MDC-3.13"
/gene_synonym="SCC-S2"
/codon_start=1
/product="tumor necrosis factor, alpha-induced protein 8"
/protein_id="AAH07014.1"
/db_xref="GeneID:25816"
/db_xref="HGNC:HGNC:17260"
/translation="MHSEAEESKEVATDVFNSKNLAVQAQKKILGKMVSKSIATTLID
DTSSEVLDELYRVTREYTQNKKEAEKIIKNLIKTVIKLAILYRNNQFNQDELALMEKF
KKKVHQLAMTVVSFHQVDYTFDRNVLSRLLNECREMLHQIIQRHLTAKSHGRVNNVFD
HFSDCEFLAALYNPFGNFKPHLQKLCDGINKMLDEENI"
BASE COUNT 668 a 359 c 422 g 632 t
ORIGIN
1 ggctccgggg gcggactccc gccgcccagc tgacacgcga ttcgtcactc ttgcagaact
61 ttccccctga aaatccctgc accagaaccc gctctcccgc cccggggagg ttttgatttt
121 agtggctttc ttccttttat tttccgtcgt gtgcggattt cgctgcagag cgaacttgcg
181 gctcgtccga gtacatgtga gcggtaatcg cccctgcagc tggttatcct gacattatgc
241 actccgaagc agaagaatcc aaggaagtgg ccacagatgt ctttaattcc aaaaacctgg
301 ccgttcaggc acaaaagaag atcttgggta aaatggtgtc caaatccatc gccaccacct
361 taatagacga cacaagtagt gaggtgctgg atgagctcta cagagtgacc agggagtaca
421 cccaaaacaa gaaggaggca gagaagatca tcaagaacct catcaagaca gtcatcaagc
481 tggccattct ttataggaat aatcagttta atcaagatga gctagcattg atggagaaat
541 ttaagaagaa agttcatcag cttgctatga ccgtggtcag tttccatcag gtggattata
601 cctttgaccg gaatgtgtta tccaggctgt taaatgaatg cagagagatg ctgcaccaaa
661 tcattcagcg ccacctcact gccaagtcac atggacgggt taataatgtg tttgatcatt
721 tttcagattg tgaatttttg gctgccttgt ataatccttt tgggaatttt aaaccccact
781 tacaaaaact atgtgatggt atcaacaaaa tgttggatga agagaacata tgagcacatg
841 agttaagatt gtgactgatc atgatttatt tgaagatgga gcactgctga tttatgaagg
901 aaaaaagaag aattttctaa agattacaca tatttcagaa agactttacc caattcagtt
961 gtcagacata atgatttatt tgaaggcttg ttttatttga agaaaagcat attgccaaaa
1021 attctggtta aaagcttcct aacgggtaac agaccatggg agagatatgt ggttgggtaa
1081 tgcaaatgta gttatacaaa gaaaaataca gatgtctcca gacctgagga ctttttaata
1141 gggcagttgt tgtgttggtg gcacattgga tatttctaac atgtacaaag ctatgtattt
1201 tgatttactt tcatttcttg ctatgtatat gtacttttct taaaatgcca agaactttct
1261 cttgctatca ttgctccttt tgaaacaatt caattttcat gtctacagct gactgttttg
1321 ttaagattga gtcatcgaca ttcaggattt aagtctgagg tagtcaaccc tcaggaaaaa
1381 aaaaatggct tatctgaaat cagtactgtg gaaatgaact atattagcta ttatgaataa
1441 tgtccagtat aagaatatgc ttctggaatt gagttctcct tttaagtacc aatgatactt
1501 aaatttctca gaaatgtaat ggtgtgtcat tgccttgaaa tgcttgctta gggcttcttt
1561 tatgttatct taaaaagtgc tggtgaattt tccatttttt acatccattt cacatgtaag
1621 agacaaaaaa gtctagattg gtcttgatat tgagataata aaaagtaagt agcattaaga
1681 aaggtaacaa tcttcattct acagatgaac tcattgaaac aatttagggg aatgaggggc
1741 aaaaggggag aaatactgct aaagaacatg agcataaaaa tgcgtgcgtt tcagtgttta
1801 agaaggcttg ataaagaatg tcactttttt atttaactga taagattttt gttatttttt
1861 actttgataa gtaaaccaaa gaatatttgt atttcaagca gtttgtgtgg tgtttctata
1921 taattttctg tgtataaata ataaagtagg catttgttta ttttgtaaaa aagaaatgaa
1981 aatctgctgg ccagctatgt cctctaggaa atgacagacc caaccaccag caataaacat
2041 ttccattgtc gaaaaaaaaa aaaaaaaaaa aaaaaaaaaa a
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