LOCUS BC007003 3022 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens transglutaminase 4 (prostate), mRNA (cDNA clone
MGC:12298 IMAGE:3950865), complete cds.
ACCESSION BC007003
VERSION BC007003.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3022)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3022)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (30-APR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: CLONTECH
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 16 Row: e Column: 16
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 4507478.
FEATURES Location/Qualifiers
source 1..3022
/db_xref="H-InvDB:HIT000032979"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:12298 IMAGE:3950865"
/tissue_type="Prostate"
/clone_lib="NIH_MGC_83"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..3022
/gene="TGM4"
/gene_synonym="hTGP"
/gene_synonym="TGP"
/db_xref="GeneID:7047"
/db_xref="HGNC:HGNC:11780"
/db_xref="MIM:600585"
CDS 69..2123
/gene="TGM4"
/gene_synonym="hTGP"
/gene_synonym="TGP"
/codon_start=1
/product="transglutaminase 4 (prostate)"
/protein_id="AAH07003.1"
/db_xref="GeneID:7047"
/db_xref="HGNC:HGNC:11780"
/db_xref="MIM:600585"
/translation="MMDASKELQVLHIDFLNQDNAVSHHTWEFQTSSPVFRRGQVFHL
RLVLNQPLQSYHQLKLEFSTGPNPSIAKHTLVVLDPRTPSDHYNWQATLQNESGKEVT
VAVTSSPNAILGKYQLNVKTGNHILKSEENILYLLFNPWCKEDMVFMPDEDERKEYIL
NDTGCHYVGAARSIKCKPWNFGQFEKNVLDCCISLLTESSLKPTDRRDPVLVCRAMCA
MMSFEKGQGVLIGNWTGDYEGGTAPYKWTGSAPILQQYYNTKQAVCFGQCWVFAGILT
TVLRALGIPARSVTGFDSAHDTERNLTVDTYVNENGEKITSMTHDSVWNFHVWTDAWM
KRPDLPKGYDGWQAVDATSQERSQGVFCCGPSPLTAIRKGDIFIVYDTRFVFSEVNGD
RLIWLVKMVNGQEELHVISMETTSIGKNISTKAVGQDRRRDITYEYKYPEGSSEERQV
MDHAFLLLSSEREHRRPVKENFLHMSVQSDDVLLGNSVNFTVILKRKTAALQNVNILG
SFELQLYTGKKMAKLCDLNKTSQIQGQVSEVTLTLDSKTYINSLAILDDEPVIRGFII
AEIVESKEIMASEVFTSFQYPEFSIELPNTGRIGQLLVCNCIFKNTLAIPLTDVKFSL
ESLGISSLQTSDHGTVQPGETIQSQIKCTPIKTGPKKFIVKLSSKQVKEINAQKIVLI
TK"
BASE COUNT 824 a 780 c 719 g 699 t
ORIGIN
1 gactgtgtgg aagcaccagg catcagagat agagtcttcc ctggcattgc aggagagaat
61 ctgaagggat gatggatgca tcaaaagagc tgcaagttct ccacattgac ttcttgaatc
121 aggacaacgc cgtttctcac cacacatggg agttccaaac gagcagtcct gtgttccggc
181 gaggacaggt gtttcacctg cggctggtgc tgaaccagcc cctacaatcc taccaccaac
241 tgaaactgga attcagcaca gggccgaatc ctagcatcgc caaacacacc ctggtggtgc
301 tcgacccgag gacgccctca gaccactaca actggcaggc aacccttcaa aatgagtctg
361 gcaaagaggt cacagtggct gtcaccagtt cccccaatgc catcctgggc aagtaccaac
421 taaacgtgaa aactggaaac cacatcctta agtctgaaga aaacatccta taccttctct
481 tcaacccatg gtgtaaagag gacatggttt tcatgcctga tgaggacgag cgcaaagagt
541 acatcctcaa tgacacgggc tgccattacg tgggggctgc cagaagtatc aaatgcaaac
601 cctggaactt tggtcagttt gagaaaaatg tcctggactg ctgcatttcc ctgctgactg
661 agagctccct caagcccaca gataggaggg accccgtgct ggtgtgcagg gccatgtgtg
721 ctatgatgag ctttgagaaa ggccagggcg tgctcattgg gaattggact ggggactacg
781 aaggtggcac agccccatac aagtggacag gcagtgcccc gatcctgcag cagtactaca
841 acacgaagca ggctgtgtgc tttggccagt gctgggtgtt tgctgggatc ctgactacag
901 tgctgagagc gttgggcatc ccagcacgca gtgtgacagg cttcgattca gctcacgaca
961 cagaaaggaa cctcacggtg gacacctatg tgaatgagaa tggcgagaaa atcaccagta
1021 tgacccacga ctctgtctgg aatttccatg tgtggacgga tgcctggatg aagcgaccgg
1081 atctgcccaa gggctacgac ggctggcagg ctgtggacgc aacgtcgcag gagcgaagcc
1141 agggtgtctt ctgttgtggg ccatcaccac tgaccgccat ccgcaaaggt gacatcttta
1201 ttgtctatga caccagattc gtcttctcag aagtgaatgg tgacaggctc atctggttgg
1261 tgaagatggt gaatgggcag gaggagttac acgtaatttc aatggagacc acaagcatcg
1321 ggaaaaacat cagcaccaag gcagtgggcc aagacaggcg gagagatatc acctatgagt
1381 acaagtatcc agaaggctcc tctgaggaga ggcaggtcat ggatcatgcc ttcctccttc
1441 tcagttctga gagggagcac agacgacctg taaaagagaa ctttcttcac atgtcggtac
1501 aatcagatga tgtgctgctg ggaaactctg ttaatttcac cgtgattctt aaaaggaaga
1561 ccgctgccct acagaatgtc aacatcttgg gttcctttga actacagttg tacactggca
1621 agaagatggc aaaactgtgt gacctcaata agacctcgca gatccaaggt caagtatcag
1681 aagtgactct gaccttggac tccaagacct acatcaacag cctggctata ttagatgatg
1741 agccagttat cagaggtttc atcattgcgg aaattgtgga gtctaaggaa atcatggcct
1801 ctgaagtatt cacgtctttc cagtaccctg agttctctat agagttgcct aacacaggca
1861 gaattggcca gctacttgtc tgcaattgta tcttcaagaa taccctggcc atccctttga
1921 ctgacgtcaa gttctctttg gaaagcctgg gcatctcctc actacagacc tctgaccatg
1981 ggacggtgca gcctggtgag accatccaat cccaaataaa atgcacccca ataaaaactg
2041 gacccaagaa atttatcgtc aagttaagtt ccaaacaagt gaaagagatt aatgctcaga
2101 agattgttct catcaccaag tagccttgtc tgatgctgtg gagccttagt tgagatttca
2161 gcatttccta ccttgtgctt agctttcaga ttatggatga ttaaatttga tgacttatat
2221 gagggcagat tcaagagcca gcaggtcaaa aaggccaaca caaccataag cagccagacc
2281 cacaaggcca ggtcctgtgc tatcacaggg tcacctcttt tacagttaga aacaccagcc
2341 gaggccacag aatcccatcc ctttcctgag tcatggcctc aaaaatcagg gccaccattg
2401 tctcaattca aatccataga tttcgaagcc acagagtctc tccctggagc agcagactat
2461 gggcagccca gtgctgccac ctgctgacga cccttgagaa gctgccatat cttcaggcca
2521 tgggttcacc agccctgaag gcacctgtca actggagtgc tctctcagca ctgggatggg
2581 cctgatagaa gtgcattctc ctcctattgc ctccattctc ctctctctat ccctgaaatc
2641 caggaagtcc ctctcctggt gctccaagca gtttgaagcc caatctgcaa ggacatttct
2701 caagggccat gtggttttgc agacaaccct gtcctcaggc ctgaactcac catagagacc
2761 catgtcagca aacggtgacc agcaaatcct cttcccttat tctaaagctg ccccttggga
2821 gactccaggg agaaggcatt gcttcctccc tggtgtgaac tctttctttg gtattccatc
2881 cactatcctg gcaactcaag gctgcttctg ttaactgaag cctgctcctt cttgttctgc
2941 cctccagaga tttgctcaaa tgatcaataa gctttaaatt aaactctact tcaaaaaaaa
3001 aaaaaaaaaa aaaaaaaaaa aa
//