LOCUS BC006974 1373 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens chromatin modifying protein 5, mRNA (cDNA clone MGC:12180 IMAGE:3996277), complete cds. ACCESSION BC006974 VERSION BC006974.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1373) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1373) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (30-APR-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: CLONTECH Laboratories, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 16 Row: b Column: 2 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 20127557. FEATURES Location/Qualifiers source 1..1373 /db_xref="H-InvDB:HIT000032961" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:12180 IMAGE:3996277" /tissue_type="Bladder, carcinoma" /clone_lib="NIH_MGC_53" /lab_host="DH10B" /note="Vector: pDNR-LIB" gene 1..1373 /gene="CHMP5" /gene_synonym="CGI-34" /gene_synonym="HSPC177" /gene_synonym="PNAS-2" /db_xref="GeneID:51510" /db_xref="HGNC:HGNC:26942" CDS 31..690 /gene="CHMP5" /gene_synonym="CGI-34" /gene_synonym="HSPC177" /gene_synonym="PNAS-2" /codon_start=1 /product="chromatin modifying protein 5" /protein_id="AAH06974.1" /db_xref="GeneID:51510" /db_xref="HGNC:HGNC:26942" /translation="MNRLFGKAKPKAPPPSLTDCIGTVDSRAESIDKKISRLDAELVK YKDQIKKMREGPAKNMVKQKALRVLKQKRMYEQQRDNLAQQSFNMEQANYTIQSLKDT KTTVDAMKLGVKEMKKAYKQVKIDQIEDLQDQLEDMMEDANEIQEALSRSYGTPELDE DDLEAELDALGDELLADEDSSYLDEAASAPAIPEGVPTDTKNKDGVLVDEFGLPQIPA S" BASE COUNT 451 a 218 c 292 g 412 t ORIGIN 1 agtgtttggg tttcttcgcg gctgctcaag atgaaccgac tcttcgggaa agcgaaaccc 61 aaggctccgc cgcccagcct gactgactgc attggcacgg tggacagtag agcagaatcc 121 attgacaaga agatttctcg attggatgct gagctagtga agtataagga tcagatcaag 181 aagatgagag agggtcctgc aaagaatatg gtcaagcaga aagccttgcg agttttaaag 241 caaaagagga tgtatgagca gcagcgggac aatcttgccc aacagtcatt caacatggaa 301 caagccaatt ataccatcca gtctttgaag gacaccaaga ccacggttga tgctatgaaa 361 ctgggagtaa aggaaatgaa gaaggcatac aagcaagtga agatcgacca gattgaggat 421 ttacaagacc agctagagga tatgatggaa gatgcaaatg aaatccaaga agcactgagt 481 cgcagttatg gcaccccaga actggatgaa gatgatttag aagcagagtt ggatgcacta 541 ggtgatgagc ttctggctga tgaagacagt tcttatttgg atgaggcagc atctgcacct 601 gcaattccag aaggtgttcc cactgataca aagaacaagg atggagttct ggtggatgaa 661 tttggattgc cacagatccc tgcttcatag atttgcatca ttcaagcata tcttgtaaaa 721 caaacacata ttatgggact aggaaatatt tatctttcca aatttgccat aacagattta 781 ggtttctttc ctttctttga aggaaagttt aattacattg ctcttttatt ttttccatta 841 agagactcat tgcttgggaa atgctttctt cgtactaaaa tttgattcct ttttttctta 901 tgaaaaacga actcagttta aaagtatttt tagctcgtat gacttgtttt cattcattaa 961 taataatttg aaataaaact aaggaaatgg aatcttaaaa gtctatgaca gtgtaactct 1021 acagtctcaa aatgacctga taaattgata agacaaagat gagattattg gggctgttca 1081 tattatgatt cagaatcatt ttctattgtg gtattatagg ttggttaaag tgatggcctt 1141 tttgatgggt tttgttgtgt cttgtgaaca agtcgttact gtgtccatta ttggaatgga 1201 attatcacta ctgtatcatg agtgggtatt ttgattctat ggttccctca gtattacatc 1261 ttgacttgta atcaattatg aatatttctt gatatttaat gtataggaca tttatttata 1321 ctcaataaat atttttcaaa aggaaaaaaa aaaaaaaaaa aaaaaaaaaa aaa //