LOCUS BC006972 1962 bp mRNA linear HUM 11-SEP-2007
DEFINITION Homo sapiens polymerase (RNA) I polypeptide D, 16kDa, mRNA (cDNA
clone IMAGE:3827890), complete cds.
ACCESSION BC006972
VERSION BC006972.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1962)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1962)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (30-APR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 16 Row: a Column: 19
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 7705739
This clone has the following problem: The cds is short compared to
the longest cds in the locus.
FEATURES Location/Qualifiers
source 1..1962
/db_xref="H-InvDB:HIT000050472"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3827890"
/tissue_type="Kidney, hypernephroma"
/clone_lib="NIH_MGC_58"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..1962
/gene="POLR1D"
/gene_synonym="POLR1C"
/gene_synonym="RPA16"
/gene_synonym="RPA9"
/gene_synonym="RPAC2"
/gene_synonym="RPO1-3"
/db_xref="GeneID:51082"
/db_xref="HGNC:HGNC:20422"
CDS 110..211
/gene="POLR1D"
/gene_synonym="POLR1C"
/gene_synonym="RPA16"
/gene_synonym="RPA9"
/gene_synonym="RPAC2"
/gene_synonym="RPO1-3"
/codon_start=1
/product="POLR1D protein"
/protein_id="AAH06972.1"
/db_xref="GeneID:51082"
/db_xref="HGNC:HGNC:20422"
/translation="MEEDQELERKAIEELLKEAKRGKTRAETMGPMG"
BASE COUNT 605 a 436 c 388 g 533 t
ORIGIN
1 gccttccgtc ggtcggtcct tgcttcctgc ttcgcctccg cgcctcgcgc tatgggacag
61 agcccccgat ccgccagcac cacctgagga tccagaaacc gccccagcga tggaagagga
121 tcaggagctg gagaggaaag caatagaaga actgcttaag gaggcaaaac gtgggaaaac
181 tagagctgaa acaatgggac ccatgggttg aagtgtcctc ttgctagcac caataaaaga
241 tttctaatta acacaattaa aaacacattg ccctctcata aagagcaaga ccatgaacaa
301 aaagagggcg ataaggaacc agccaagagc caggcccaga aagaagaaaa cccaaagaaa
361 cacagaagcc atccttacaa gcacagcttc cgcgctcgag gttccgccag ttactccccg
421 ccacgaaagc ggagcagcca ggacaagtac gaaaagcggt ccaaccggcg gtgaggctgg
481 aaccagggcc agccagccct gcgggcctcc gtgctccttc ggggtgcggt gtgcggagaa
541 ggcctgagct ggcagggcaa acacctgaga gtgactttga cattaggtcc tttgttgttt
601 ttaaagaggc tgctggccac aggcaaaaaa aatgacctag caactcttga ggaaacaagt
661 gcaaaggagg atgtcttggc aagtttaagc tacttctgca gtgtagtaga cttacatatt
721 gttgtttatc ttgtttggaa gtgtgtttca aaataaacat gtctagaatt taaagttttc
781 agagattgtt aaaactggtt ccaatttttt ggtcatctct cagaaaaata aaatacttat
841 aaatcctata ttttactttt tgggggtatt acatttaaaa tttagaaatc atcagtccag
901 tgaccatatt tatgaaaagc tgtagccctc caaggtctgg gaatttatcg agaagctctt
961 tgatagctct gcatttgttt tcccttaggt gaacaatgta ggaaatcctc aaagtggctt
1021 tgaatttaat gctccacttc agttaccaga ggttaaaaat gggttttgtt gtttcctgtg
1081 cattctcaaa ctcatttatt agatagaaca atctttctat atttaatttt tttaatatat
1141 aggtcttaag tggtgcttta aaaagaaccc tcacaagtta aaaattaaga gttgtttcag
1201 tgctagatct tgccagctaa agacttgtga taccactata tagtatagtt gttccagaaa
1261 tcttcatttt aaatagaagt gtttacaatg ccttttttcc cccagtattg gttttcaata
1321 cctgttttca tatacaatta caaacctttc aaacctgtat tccttcttta tactcaggaa
1381 aatgtcacca agcaccctcc tccccagttc acaaaaggaa gaagatgaag attctgtctc
1441 cctgctcccc ctccccagtt ttccaaagtg tctgagcata tgcctggctg tcctcagatc
1501 atcaccatgc cacatccctg ctccctactt cctggcagcc aagaaaagcc ctttctacat
1561 gctagaagga aatacatcca aaaagttagc attggagtgt tagaaactag aatagacctc
1621 tccgccaccg agctgctgtg tcacgccctc agcctgctag ggagtgacaa gcccaagtca
1681 ttcttgatcc accccttctc ccaccccaga tcccagggac tcatcctgtg actttgtaac
1741 cacactcatt cctttcaaac acagaggagg aattattgct tcatctgact ttattcaaat
1801 ctagttatgt attggcctaa attatttgtg caaaatttga aatgtttttt atttaaatat
1861 tagaaatagc acaaagtcat ggagttttta aaaattgtta taattaagta aaaataaagc
1921 tgaattgtgt cgaaaaaaaa aaaaaaaaaa aaaaaaaaaa aa
//