LOCUS BC006969 1378 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens dynein, cytoplasmic 2, light intermediate chain 1,
mRNA (cDNA clone MGC:12166 IMAGE:3828551), complete cds.
ACCESSION BC006969
VERSION BC006969.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1378)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1378)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (30-APR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 16 Row: m Column: 21
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 40548417.
FEATURES Location/Qualifiers
source 1..1378
/db_xref="H-InvDB:HIT000032958"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:12166 IMAGE:3828551"
/tissue_type="Kidney, hypernephroma"
/clone_lib="NIH_MGC_58"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..1378
/gene="DYNC2LI1"
/gene_synonym="CGI-60"
/gene_synonym="D2LIC"
/gene_synonym="DKFZP564A033"
/gene_synonym="LIC3"
/db_xref="GeneID:51626"
/db_xref="HGNC:HGNC:24595"
CDS 60..1118
/gene="DYNC2LI1"
/gene_synonym="CGI-60"
/gene_synonym="D2LIC"
/gene_synonym="DKFZP564A033"
/gene_synonym="LIC3"
/codon_start=1
/product="dynein, cytoplasmic 2, light intermediate chain
1"
/protein_id="AAH06969.1"
/db_xref="GeneID:51626"
/db_xref="HGNC:HGNC:24595"
/translation="MPSETLWEIAKAEVEKRGINGSEGDGAEIAEKFVFFIGSKNGGK
TTIILRCLDRDEPPKPTLALEYTYGRRAKGHNTPKDIAHFWELGGGTSLLDLISIPIT
GDTLRTFSLVLVLDLSKPNDLWPTMENLLQATKSHVDKVIMKLGKTNAKAVSEMRQKI
WNNMPKDHPQDHELIDPFPVPLVIIGSKYDVFQDFESEKRKVICKTLRFVAHYYGASL
MFTSKSEALLLKIRGVINQLAFGIDKSKSICVDQNKPLFITAGLDSFGQIGSPPVPEN
DIGKLHAHSPMELWKKVYEKLFPPKSINTLKDIKDPARDPQYAENEVDEMRIQKDLEL
EQYKRSSSKSWKQIELDS"
BASE COUNT 481 a 236 c 280 g 381 t
ORIGIN
1 gtttctaggc tggtcactac tccgagcctg tgacgtttgc ggcagccagg ccgtcgacga
61 tgcccagtga aactctctgg gaaattgcaa aagctgaagt ggaaaaaagg ggaattaatg
121 gaagtgaagg tgatggagct gaaattgcag aaaaatttgt tttcttcatt ggcagtaaaa
181 atgggggaaa gactactatt attctaaggt gtcttgacag agatgaacca ccaaaaccaa
241 ccttagcttt ggaatataca tatggaagaa gagcaaaagg gcacaacaca ccaaaagata
301 tcgctcactt ttgggaactc ggtggaggaa cctctttatt ggacttaatc agcataccca
361 tcacaggtga caccttacgg acgttttctc ttgttctcgt tctggatctt tcaaaaccta
421 atgatctctg gcccaccatg gaaaatctct tgcaagccac aaaaagccat gtagacaaag
481 tgataatgaa actgggaaag acaaatgcta aagcagtttc tgaaatgaga cagaagatct
541 ggaataatat gccgaaggat catcctcagg atcatgaatt aattgaccca tttccggtac
601 ctctggtcat aattggaagt aaatatgatg tttttcagga ttttgagtct gagaagagaa
661 aggtaatatg caagacactt cgatttgttg cacattatta tggagcatca ttaatgttta
721 ccagtaaatc agaagctcta ttactaaaaa tacgtggagt tatcaaccag ttggcatttg
781 gcattgacaa aagcaaatca atatgtgtgg atcagaataa accgctgttt atcacagcag
841 gattggattc tttcggtcaa ataggatctc ctcctgttcc tgaaaatgac attggaaagc
901 ttcatgccca ctcacctatg gagttgtgga aaaaagtgta tgaaaagctc tttccaccaa
961 agagtattaa cacgctgaaa gatatcaagg accctgcgag agatcctcag tatgctgaaa
1021 atgaagtcga tgagatgaga attcagaagg atctggaact ggaacagtac aaaagaagtt
1081 cttccaagtc ttggaaacaa atcgagcttg attcttgaac ctatttcaat tattgtatat
1141 ttatttcttc ttttccaaat acaaataaga ttatactgtg aattaactat tgtggcaata
1201 tgtgaagaaa gttaaactgt ataatttgtt aaaggacaag ctggatttct tggactagtg
1261 catctccctg tatatcttga agctttttaa aaggaaaaat tattgtagaa ccacgtgtaa
1321 ttttttttaa aataaaagaa tcttctacaa aaaaaaaaaa aaaaaaaaaa aaaaaaaa
//