LOCUS BC006848 1268 bp mRNA linear HUM 09-JUN-2008 DEFINITION Homo sapiens itchy E3 ubiquitin protein ligase homolog (mouse), mRNA (cDNA clone IMAGE:3451168), partial cds. ACCESSION BC006848 VERSION BC006848.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1268) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1268) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (27-APR-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Baylor College of Medicine Human Genome Sequencing Center Center code: BCM-HGSC Web site: http://www.hgsc.bcm.tmc.edu/cdna/ Contact: amg@bcm.tmc.edu Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H., Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati, A.N., Gibbs, R.A. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 3 Row: l Column: 22. FEATURES Location/Qualifiers source 1..1268 /db_xref="H-InvDB:HIT000086707" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:3451168" /tissue_type="Placenta, choriocarcinoma" /clone_lib="NIH_MGC_10" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene <1..1268 /gene="ITCH" /gene_synonym="AIF4" /gene_synonym="AIP4" /gene_synonym="dJ468O1.1" /gene_synonym="NAPP1" /db_xref="GeneID:83737" /db_xref="HGNC:HGNC:13890" /db_xref="MIM:606409" CDS <1..358 /gene="ITCH" /gene_synonym="AIF4" /gene_synonym="AIP4" /gene_synonym="dJ468O1.1" /gene_synonym="NAPP1" /codon_start=2 /product="ITCH protein" /protein_id="AAH06848.1" /db_xref="GeneID:83737" /db_xref="HGNC:HGNC:13890" /db_xref="MIM:606409" /translation="QEIDLNDWQRHAIYRHYARTSKQIMWFWQFVKEIDNEKRMRLLQ FVTGTCRLPVGGFADLMGSNGPQKFCIEKVGKENWLPRSHTCFNRLDLPPYKSYEQLK EKLLFAIEETEGFGQE" BASE COUNT 381 a 234 c 272 g 381 t ORIGIN 1 gcaagagatt gatttgaatg actggcaaag acatgccatc taccgtcatt atgcaaggac 61 cagcaaacaa atcatgtggt tttggcagtt tgttaaagaa attgataatg agaagagaat 121 gagacttctg cagtttgtta ctggaacctg ccgattgcca gtaggaggat ttgctgatct 181 catggggagc aatggaccac agaaattctg cattgaaaaa gttgggaaag aaaattggct 241 acccagaagt catacctgtt ttaatcgcct ggacctgcca ccatacaaga gctatgagca 301 actgaaggaa aagctgttgt ttgccataga agaaacagaa ggatttggac aagagtaact 361 tctgagaact tgcaccatga atgggcaaga acttatttgc aatgtttgtc cttctctgcc 421 tgttgcacat cttgtaaaat tggacaatgg ctctttagag agttatctga gtgtaagtaa 481 attaatgttc tcatttagat ttatctccca gtgatttcta ctcagcgttt ccagaaatca 541 ggtctgcaaa tgactagtca gaaccttgct taacatgaga ttttaacaca acaatgaaat 601 ttgccttgtc ttattccact agtttattcc tttaacaaca atattttata tgtgtcaaaa 661 gtctcacttg ggagtagtgt ttttttcttt tagacattct gcagacatgc agggaagtcc 721 tttggtaact gcaatataca agattttcct attaagcctc ttggtaagag gcatttgtta 781 aaagtgcaag cttactcctg cttctgggga tgtgagcaaa attcgggctt gtgttctccc 841 tctcatttta gtctgacttg actattgttt ttcctttctg gcgcatgaat ccatacatca 901 ttcctggaag tgaggcaaga ctcttgcatc tctacaaagt agttttgtca atttgaattc 961 agggaaaagt tggtcacagc ctgcaaatga cttcatttgg aagtctgatt gtttcagttg 1021 cctgacaaat actacacttt acaaacaatg ttaacactgt gattccttca ttgttttaag 1081 aagttaacct agggccgggc atggtggctc atacctgtaa tcctagcact ctgggaggcc 1141 gaggcaggag gatcccttta gcccaggagt taaagaccag cctgggcaac atagggagac 1201 cctgtctttt ttttgggcag cgtggtgggg gataaataaa aaaaaaaaaa aaaaaaaaaa 1261 aaaaaaaa //