LOCUS BC006811 1767 bp mRNA linear HUM 27-OCT-2006 DEFINITION Homo sapiens peroxisome proliferator-activated receptor gamma, mRNA (cDNA clone MGC:5041 IMAGE:3447380), complete cds. ACCESSION BC006811 VERSION BC006811.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1767) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1767) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (27-APR-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Baylor College of Medicine Human Genome Sequencing Center Center code: BCM-HGSC Web site: http://www.hgsc.bcm.tmc.edu/cdna/ Contact: amg@bcm.tmc.edu Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H., Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati, A.N., Gibbs, R.A. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 3 Row: i Column: 16 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 62865855. FEATURES Location/Qualifiers source 1..1767 /db_xref="H-InvDB:HIT000032946" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:5041 IMAGE:3447380" /tissue_type="Placenta, choriocarcinoma" /clone_lib="NIH_MGC_10" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..1767 /gene="PPARG" /gene_synonym="NR1C3" /gene_synonym="PPARG1" /gene_synonym="PPARG2" /db_xref="GeneID:5468" /db_xref="HGNC:HGNC:9236" /db_xref="MIM:601487" CDS 122..1555 /gene="PPARG" /gene_synonym="NR1C3" /gene_synonym="PPARG1" /gene_synonym="PPARG2" /codon_start=1 /product="peroxisome proliferator-activated receptor gamma" /protein_id="AAH06811.1" /db_xref="GeneID:5468" /db_xref="HGNC:HGNC:9236" /db_xref="MIM:601487" /translation="MTMVDTEMPFWPTNFGISSVDLSVMEDHSHSFDIKPFTTVDFSS ISTPHYEDIPFTRTDPVVADYKYDLKLQEYQSAIKVEPASPPYYSEKTQLYNKPHEEP SNSLMAIECRVCGDKASGFHYGVHACEGCKGFFRRTIRLKLIYDRCDLNCRIHKKSRN KCQYCRFQKCLAVGMSHNAIRFGRMPQAEKEKLLAEISSDIDQLNPESADLRALAKHL YDSYIKSFPLTKAKARAILTGKTTDKSPFVIYDMNSLMMGEDKIKFKHITPLQEQSKE VAIRIFQGCQFRSVEAVQEITEYAKSIPGFVNLDLNDQVTLLKYGVHEIIYTMLASLM NKDGVLISEGQGFMTREFLKSLRKPFGDFMEPKFEFAVKFNALELDDSDLAIFIAVII LSGDRPGLLNVKPIEDIQDNLLQALELQLKLNHPESSQLFAKLLQKMTDLRQIVTEHV QLLQVIKKTETDMSLHPLLQEIYKDLY" BASE COUNT 539 a 407 c 372 g 449 t ORIGIN 1 ccagaagcct gcatttctgc attctgctta attccctttc cttagatttg aaagaagcca 61 acactaaacc acaaatatac aacaaggcca ttttctcaaa cgagagtcag cctttaacga 121 aatgaccatg gttgacacag agatgccatt ctggcccacc aactttggga tcagctccgt 181 ggatctctcc gtaatggaag accactccca ctcctttgat atcaagccct tcactactgt 241 tgacttctcc agcatttcta ctccacatta cgaagacatt ccattcacaa gaacagatcc 301 agtggttgca gattacaagt atgacctgaa acttcaagag taccaaagtg caatcaaagt 361 ggagcctgca tctccacctt attattctga gaagactcag ctctacaata agcctcatga 421 agagccttcc aactccctca tggcaattga atgtcgtgtc tgtggagata aagcttctgg 481 atttcactat ggagttcatg cttgtgaagg atgcaagggt ttcttccgga gaacaatcag 541 attgaagctt atctatgaca gatgtgatct taactgtcgg atccacaaaa aaagtagaaa 601 taaatgtcag tactgtcggt ttcagaaatg ccttgcagtg gggatgtctc ataatgccat 661 caggtttggg cggatgccac aggccgagaa ggagaagctg ttggcggaga tctccagtga 721 tatcgaccag ctgaatccag agtccgctga cctccgggcc ctggcaaaac atttgtatga 781 ctcatacata aagtccttcc cgctgaccaa agcaaaggcg agggcgatct tgacaggaaa 841 gacaacagac aaatcaccat tcgttatcta tgacatgaat tccttaatga tgggagaaga 901 taaaatcaag ttcaaacaca tcacccccct gcaggagcag agcaaagagg tggccatccg 961 catctttcag ggctgccagt ttcgctccgt ggaggctgtg caggagatca cagagtatgc 1021 caaaagcatt cctggttttg taaatcttga cttgaacgac caagtaactc tcctcaaata 1081 tggagtccac gagatcattt acacaatgct ggcctccttg atgaataaag atggggttct 1141 catatccgag ggccaaggct tcatgacaag ggagtttcta aagagcctgc gaaagccttt 1201 tggtgacttt atggagccca agtttgagtt tgctgtgaag ttcaatgcac tggaattaga 1261 tgacagcgac ttggcaatat ttattgctgt cattattctc agtggagacc gcccaggttt 1321 gctgaatgtg aagcccattg aagacattca agacaacctg ctacaagccc tggagctcca 1381 gctgaagctg aaccaccctg agtcctcaca gctgtttgcc aagctgctcc agaaaatgac 1441 agacctcaga cagattgtca cggaacacgt gcagctactg caggtgatca agaagacgga 1501 gacagacatg agtcttcacc cgctcctgca ggagatctac aaggacttgt actagcagag 1561 agtcctgagc cactgccaac atttcccttc ttccagttgc actattctga gggaaaatct 1621 gacacctaag aaatttactg tgaaaaagca ttttaaaaag aaaaggtttt agaatatgat 1681 ctattttatg catattgttt ataaagacac atttacaatt tacttttaat attaaaaatt 1741 accatattat gaaaaaaaaa aaaaaaa //