LOCUS BC006793 2416 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens GATA binding protein 3, mRNA (cDNA clone MGC:5199
IMAGE:2985843), complete cds.
ACCESSION BC006793
VERSION BC006793.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2416)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2416)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (27-APR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 3 Row: p Column: 9
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 50541957.
FEATURES Location/Qualifiers
source 1..2416
/db_xref="H-InvDB:HIT000032940"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:5199 IMAGE:2985843"
/tissue_type="Cervix, carcinoma"
/clone_lib="NIH_MGC_12"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2416
/gene="GATA3"
/gene_synonym="HDR"
/gene_synonym="MGC2346"
/gene_synonym="MGC5199"
/gene_synonym="MGC5445"
/db_xref="GeneID:2625"
/db_xref="HGNC:HGNC:4172"
/db_xref="MIM:131320"
CDS 560..1894
/gene="GATA3"
/gene_synonym="HDR"
/gene_synonym="MGC2346"
/gene_synonym="MGC5199"
/gene_synonym="MGC5445"
/codon_start=1
/product="GATA binding protein 3"
/protein_id="AAH06793.1"
/db_xref="GeneID:2625"
/db_xref="HGNC:HGNC:4172"
/db_xref="MIM:131320"
/translation="MEVTADQPRWVSHHHPAVLNGQHPDTHHPGLSHSYMDAAQYPLP
EEVDVLFNIDGQGNHVPPYYGNSVRATVQRYPPTHHGSQVCRPPLLHGSLPWLDGGKA
LGSHHTASPWNLSPFSKTSIHHGSPGPLSVYPPASSSSLSGGHASPHLFTFPPTPPKD
VSPDPSLSTPGSAGSARQDEKECLKYQVPLPDSMKLESSHSRGSMTALGGASSSTHHP
ITTYPPYVPEYSSGLFPPSSLLGGSPTGFGCKSRPKARSSTEGRECVNCGATSTPLWR
RDGTGHYLCNACGLYHKMNGQNRPLIKPKRRLSAARRAGTSCANCQTTTTTLWRRNAN
GDPVCNACGLYYKLHNINRPLTMKKEGIQTRNRKMSSKSKKCKKVHDSLEDFPKNSSF
NPAALSRHMSSLSHISPFSHSSHMLTTPTPMHPPSSLSFGPHHPSSMVTAMG"
BASE COUNT 590 a 793 c 589 g 444 t
ORIGIN
1 ggcgccgtct tgatactttc agaaagaatg cattccctgt aaaaaaaaaa aaaaaaaata
61 ctgagagagg gagagagaga gagaagaaga gagagagacg gagggagagc gagacagagc
121 gagcaacgca atctgaccga gcaggtcgta cgccgccgcc tcctcctcct ctctgctctt
181 cgctacccag gtgacccgag gagggactcc gcctccgagc ggctgaggac cccggtgcag
241 aggagcctgg ctcgcagaat tgcagagtcg tcgccccttt ttacaacctg gtcccgtttt
301 attctgccat acccagtttt tggatttttg tcttcccctt cttctctttg ctaaacgacc
361 cctccaagat aatttttaaa aaaccttctc ctttgctcac ctttgcttcc cagccttccc
421 atccccccac cgaaagcaaa tcattcaacg acccccgacc ctccgacggc aggagccccc
481 cgacctccca ggcggaccgc cctccctccc cgcgcgcggg ttccgggccc ggcgagaggg
541 cgcgagcaca gccgaggcca tggaggtgac ggcggaccag ccgcgctggg tgagccacca
601 ccaccccgcc gtgctcaacg ggcagcaccc ggacacgcac cacccgggcc tcagccactc
661 ctacatggac gcggcgcagt acccgctgcc ggaggaggtg gatgtgcttt ttaacatcga
721 cggtcaaggc aaccacgtcc cgccctacta cggaaactcg gtcagggcca cggtgcagag
781 gtaccctccg acccaccacg ggagccaggt gtgccgcccg cctctgcttc atggatccct
841 accctggctg gacggcggca aagccctggg cagccaccac accgcctccc cctggaatct
901 cagccccttc tccaagacgt ccatccacca cggctccccg gggcccctct ccgtctaccc
961 cccggcctcg tcctcctcct tgtcgggggg ccacgccagc ccgcacctct tcaccttccc
1021 gcccaccccg ccgaaggacg tctccccgga cccatcgctg tccaccccag gctcggccgg
1081 ctcggcccgg caggacgaga aagagtgcct caagtaccag gtgcccctgc ccgacagcat
1141 gaagctggag tcgtcccact cccgtggcag catgaccgcc ctgggtggag cctcctcgtc
1201 gacccaccac cccatcacca cctacccgcc ctacgtgccc gagtacagct ccggactctt
1261 cccccccagc agcctgctgg gcggctcccc caccggcttc ggatgcaagt ccaggcccaa
1321 ggcccggtcc agcacagaag gcagggagtg tgtgaactgt ggggcaacct cgaccccact
1381 gtggcggcga gatggcacgg gacactacct gtgcaacgcc tgcgggctct atcacaaaat
1441 gaacggacag aaccggcccc tcattaagcc caagcgaagg ctgtctgcag ccaggagagc
1501 agggacgtcc tgtgcgaact gtcagaccac cacaaccaca ctctggagga ggaatgccaa
1561 tggggaccct gtctgcaatg cctgtgggct ctactacaag cttcacaata ttaacagacc
1621 cctgactatg aagaaggaag gcatccagac cagaaaccga aaaatgtcta gcaaatccaa
1681 aaagtgcaaa aaagtgcatg actcactgga ggacttcccc aagaacagct cgtttaaccc
1741 ggccgccctc tccagacaca tgtcctccct gagccacatc tcgcccttca gccactccag
1801 ccacatgctg accacgccca cgccgatgca cccgccatcc agcctgtcct ttggaccaca
1861 ccacccctcc agcatggtca ccgccatggg ttagagccct gctcgatgct cacagggccc
1921 ccagcgagag tccctgcagt ccctttcgac ttgcattttt gcaggagcag tatcatgaag
1981 cctaaacgcg atggatatat gtttttgaag gcagaaagca aaattatgtt tgccactttg
2041 caaaggagct cactgtggtg tctgtgttcc aaccactgaa tctggacccc atctgtgaat
2101 aagccattct gactcatatc ccctatttaa cagggtctct agtgctgtga aaaaaaaaaa
2161 tgctgaacat tgcatataac ttatattgta agaaatactg tacaatgact ttattgcatc
2221 tgggtagctg taaggcatga aggatgccaa gaagtttaag gaatatggga gaaatagtgt
2281 ggaaattaag aagaaactag gtctgatatt caaatggaca aactgccagt tttgtttcct
2341 ttcactggcc acagttgttt gatgcattaa aagaaaataa aaaaaagaaa aaagagaaaa
2401 gaaaaaaaaa aaaaaa
//