LOCUS BC006568 3311 bp mRNA linear HUM 11-AUG-2006
DEFINITION Homo sapiens SAPS domain family, member 2, mRNA (cDNA clone
MGC:3791 IMAGE:3532211), complete cds.
ACCESSION BC006568
VERSION BC006568.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3311)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3311)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (24-APR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC006568.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 11 Row: l Column: 9
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 55749632.
FEATURES Location/Qualifiers
source 1..3311
/db_xref="H-InvDB:HIT000050471"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:3791 IMAGE:3532211"
/tissue_type="Muscle, rhabdomyosarcoma"
/clone_lib="NIH_MGC_17"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..3311
/gene="SAPS2"
/gene_synonym="dJ579N16.1"
/gene_synonym="SAP190"
/db_xref="GeneID:9701"
/db_xref="HGNC:HGNC:19253"
CDS 368..3166
/gene="SAPS2"
/gene_synonym="dJ579N16.1"
/gene_synonym="SAP190"
/codon_start=1
/product="SAPS domain family, member 2"
/protein_id="AAH06568.1"
/db_xref="GeneID:9701"
/db_xref="HGNC:HGNC:19253"
/translation="MFWKFDLNTTSHVDKLLDKEHVTLQELMDEDDILQECKAQNQKL
LDFLCRQQCMEELVSLITQDPPLDMEEKVRFKYPNTACELLTCDVPQISDRLGGDESL
LSLLYDFLDHEPPLNPLLASFFSKTIGNLIARKTEQVITFLKKKDKFISLVLKHIGTS
ALMDLLLRLVSCVEPAGLRQDVLHWLNEEKVIQRLVELIHPSQDEDRQSNASQTLCDI
VRLGRDQGSQLQEALEPDPLLTALESQDCVEQLLKNMFDGDRTESCLVSGTQVLLTLL
ETRRVGTEGLVDSFSQGLERSYAVSSSVLHGIEPRLKDFHQLLLNPPKKKAILTTIGV
LEEPLGNARLHGARLMAALLHTNTPSINQELCRLNTMDLLLDLFFKYTWNNFLHFQVE
LCIAAILSHAAREERTEASGSESRVEPPHENGNRSLETPQPAASLPDNTMVTHLFQKC
CLVQRILEAWEANDHTQAAGGMRRGNMGHLTRIANAVVQNLERGPVQTHISEVIRGLP
ADCRGRWESFVEETLTETNRRNTVDLAFSDYQIQQMTANFVDQFGFNDEEFADQDDNI
NAPFDRIAEINFNIDADEDSPSAALFEACCSDRIQPFDDDEDEDIWEDSDTRCAARVM
ARPRFGAPHASESCSKNGPERGGQDGKASLEAHRDAPGAGAPPAPGKKEAPPVEGDSE
GAMWTAVFDEPANSTPTAPGVVRDVGSSVWAAGTSAPEEKGWAKFTDFQPFCCSESGP
RCSSPVDTECSHAEGSRSQGPEKAFSPASPCAWNVCVTRKAPLLASDSSSSGGSHSED
GDQKAASAMDAVSRGPGREAPPLPTVARTEEAVGRVGCADSRLLSPACPAPKEVTAAP
AVAVPPEATVAITTALSKAGPAIPTPAVSSALAVAVPLGPIMAVTAAPAMVATLGTVT
KDGKTDAPPEGAALNGPV"
BASE COUNT 744 a 964 c 994 g 609 t
ORIGIN
1 ccattttgga gcgatcggag tgccgcccgc ggccccgagt cggtctcgag ccgccggccg
61 gccgtgccgg tgtccgtagg cgctgcgccc tcggccgggc ccatgtgtgt gcggcccgcc
121 cgaggccgcc cgggctttgc ctccaccagc gccctggcct ccgctcgggc ctccacacgg
181 gcctccgaag agctgccgcg acgcccggcc cgcagggcag gtaaagagat tataaatctt
241 ccactgaatg aaaaaaattt tcttaaagct gcatatactc caagaaaaaa accacaaatg
301 tttttctgtt ttgcctgaat acatgattta aacaagagat ttccacagaa gctctgcggc
361 cgtcaccatg ttctggaagt ttgacttgaa caccacgtcc catgttgaca agctgctgga
421 caaggagcat gtgacgctgc aggagttaat ggatgaagat gacatcttgc aggagtgtaa
481 ggctcagaac cagaagctgc tggacttcct gtgcaggcag cagtgcatgg aggagctggt
541 gagcctcatc acacaggatc cgcccctgga catggaggag aaggtccgct tcaaatatcc
601 aaacacagcc tgtgagcttc tgacttgtga tgtgccgcag atcagcgacc gcctcggtgg
661 ggacgagagc ctgctgagcc tcctgtacga cttcttggac catgagccgc ctctcaatcc
721 tctgctcgcc agttttttca gcaagaccat tggcaatctc attgcaagaa aaaccgaaca
781 ggtgattacg tttttgaaga agaaggacaa gttcatcagc ctggtgttga agcacatcgg
841 cacctcagcg cttatggacc tgctgctgcg cctggtcagc tgtgtggagc cagccgggct
901 ccggcaggac gtcctgcact ggctgaatga agagaaggtc atccagaggc ttgtggagtt
961 gatccacccg agccaggatg aagataggca gtcaaatgct tctcagactc tctgtgacat
1021 agttaggctg ggcagagacc agggcagtca gctgcaagag gctctggagc cagacccgct
1081 cctcacagcg ctggagtcgc aggactgtgt ggagcagctt ctgaagaaca tgtttgatgg
1141 agaccggacg gagagctgcc tcgtcagtgg gactcaggtg ttactcacct tgctggaaac
1201 caggcgggtt gggacagagg gcttggtgga ctccttttct cagggactgg aaaggtcata
1261 cgctgtcagc agcagcgtac tacacggcat cgagcctcgg ctgaaggact tccaccagct
1321 cctgctcaac ccgcccaaga agaaagcgat cctgaccacc attggtgtgc tggaggagcc
1381 cctggggaat gcccgtctgc atggcgcccg cctcatggca gcactgctgc acacaaacac
1441 acccagcatc aaccaggagc tctgccggct caacacgatg gacttactgc tggacttgtt
1501 ctttaagtac acctggaata actttttgca cttccaagtg gaactatgca tagccgctat
1561 tctctcccac gctgcccgtg aggagaggac agaagccagc ggatccgaga gcagggtgga
1621 gcctccgcat gagaacggga accggagcct ggagactccc cagccggccg ccagcctccc
1681 tgacaacaca atggtgaccc acctgttcca gaagtgctgc ctggtgcaga ggatcctgga
1741 ggcctgggaa gccaacgacc acacgcaggc agcgggtggc atgagacgtg ggaacatggg
1801 ccacctcaca cggatcgcca acgcggtggt gcagaacctg gagcggggcc ctgtgcagac
1861 gcacatcagc gaggtcatcc gagggctccc tgcggactgc cgtggccgct gggagagctt
1921 cgtggaggag acgctgacgg agacgaaccg caggaacact gtggacctgg ccttctctga
1981 ctaccagatc cagcagatga cagccaactt cgtggatcag tttggcttca atgatgagga
2041 gtttgccgac caggacgaca acatcaatgc cccgtttgac aggatcgcag agatcaactt
2101 caacatcgac gctgacgagg acagtcccag cgcagctctg tttgaggcct gctgcagtga
2161 ccgcatccag ccctttgatg atgatgagga cgaggacatc tgggaggaca gtgacactcg
2221 ctgtgctgcc cgggtgatgg ccagacccag gtttggagcc ccccatgctt cagagagttg
2281 ctcaaagaat ggcccagagc gtggaggcca ggatgggaag gcgagcttgg aagcacacag
2341 agatgcacct ggggcaggtg ccccaccggc ccccgggaag aaggaagccc cccctgtgga
2401 gggtgactca gaaggcgcca tgtggacggc agtgtttgat gagccagcga actcaacgcc
2461 cacagcccca ggagtggtga gggacgtggg ttccagtgtg tgggcagctg gcacctcagc
2521 tccagaggag aaaggctggg ccaagttcac tgacttccaa cctttctgct gctccgagtc
2581 agggcccagg tgcagctctc cggtggacac agaatgcagc catgctgagg gcagccggag
2641 ccaaggccct gagaaagcct tcagcccggc ttctccatgt gcctggaacg tgtgtgtcac
2701 caggaaggcc cccctgctgg cctctgacag tagctcctct gggggctccc acagcgagga
2761 tggcgaccag aaggcagcga gtgccatgga tgcggtgagc aggggtcccg gccgggaggc
2821 ccccccgctg cccacagtgg ccaggacaga ggaggcggtc ggcagggtcg ggtgtgctga
2881 cagccggctg ttaagccctg cctgccccgc gccaaaggaa gtgactgctg ccccagccgt
2941 ggctgtgccc cccgaggcta ctgtggccat caccacagca ctgagcaagg ctggccccgc
3001 catacccacc ccagcagtct cttctgcact ggccgtggcg gtccccctag ggcccatcat
3061 ggcagtcaca gcagccccag ccatggtggc caccctgggg acagtgacaa aggacgggaa
3121 gacagatgcc ccgccagaag gagctgcctt aaatggccca gtgtgatgct gctgccgccc
3181 ggccacggcc caccctggtc aggctgcctc cttaatcgag aaaactacct ggtgatgcaa
3241 tctttttttt tttaatttaa tttaatttta aaataaatgc tgcattggta aaaaaaaaaa
3301 aaaaaaaaaa a
//