LOCUS BC006527 1999 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens dihydrouridine synthase 2-like, SMM1 homolog (S.
cerevisiae), mRNA (cDNA clone MGC:1050 IMAGE:2988128), complete
cds.
ACCESSION BC006527
VERSION BC006527.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1999)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1999)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (24-APR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC006527.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 3 Row: h Column: 3
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 34147639.
FEATURES Location/Qualifiers
source 1..1999
/db_xref="H-InvDB:HIT000032900"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:1050 IMAGE:2988128"
/tissue_type="Colon, adenocarcinoma"
/clone_lib="NIH_MGC_15"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1999
/gene="DUS2L"
/gene_synonym="DUS2"
/gene_synonym="FLJ20399"
/gene_synonym="SMM1"
/gene_synonym="URLC8"
/db_xref="GeneID:54920"
/db_xref="HGNC:HGNC:26014"
/db_xref="MIM:609707"
CDS 150..1631
/gene="DUS2L"
/gene_synonym="DUS2"
/gene_synonym="FLJ20399"
/gene_synonym="SMM1"
/gene_synonym="URLC8"
/codon_start=1
/product="dihydrouridine synthase 2-like, SMM1 homolog (S.
cerevisiae)"
/protein_id="AAH06527.1"
/db_xref="GeneID:54920"
/db_xref="HGNC:HGNC:26014"
/db_xref="MIM:609707"
/translation="MILNSLSLCYHNKLILAPMVRVGTLPMRLLALDYGADIVYCEEL
IDLKMIQCKRVVNEVLSTVDFVAPDDRVVFRTCEREQNRVVFQMGTSDAERALAVARL
VENDVAGIDVNMGCPKQYSTKGGMGAALLSDPDKIEKILSTLVKGTRRPVTCKIRILP
SLEDTLSLVKRIERTGIAAIAVHGRKREERPQHPVSCEVIKAIADTLSIPVIANGGSH
DHIQQYSDIEDFRQATAASSVMVARAAMWNPSIFLKEGLRPLEEVMQKYIRYAVQYDN
HYTNTKYCLCQMLREQLESPQGRLLHAAQSSREICEAFGLGAFYEETTQELDAQQARL
SAKTSEQTGEPAEDTSGVIKMAVKFDRRAYPAQITPKMCLLEWCRREKLAQPVYETVQ
RPLDRLFSSIVTVAEQKYQSTLWDKSKKLAEQAAAIVCLRSQGLPEGRLGEESPSLHK
RKREAPDQDPGGPRAQELAQPGDLCKKPFVALGSGEESPLEGW"
BASE COUNT 552 a 486 c 542 g 419 t
ORIGIN
1 tggagcaccg tgaggaagaa gcgaggttct ttttaagagt tcagctgcga gatatcaaac
61 aaagaattac tctgtacaaa gccagaacac atatatcaaa gtaatcctga agtatcagaa
121 caaaataata ggctgtaaca gaggaggaaa tgattttgaa tagcctctct ctgtgttacc
181 ataataagct aatcctggcc ccaatggttc gggtagggac tcttccaatg aggctgctgg
241 ccctggatta tggagcggac attgtttact gtgaggagct gatcgacctc aagatgattc
301 agtgcaagag agttgttaat gaggtgctca gcacagtgga ctttgtcgcc cctgatgatc
361 gagttgtctt ccgcacctgt gaaagagagc agaacagggt ggtcttccag atggggactt
421 cagacgcaga gcgagccctt gctgtggcca ggcttgtaga aaatgatgtg gctggtattg
481 atgtcaacat gggctgtcca aaacaatatt ccaccaaggg aggaatggga gctgccctgc
541 tgtcagaccc tgacaagatt gagaagatcc tcagcactct tgttaaaggg acacgcagac
601 ctgtgacctg caagattcgc atcctgccat cgctagaaga taccctgagc cttgtgaagc
661 ggatagagag gactggcatt gctgccatcg cagttcatgg gaggaagcgg gaggagcgac
721 ctcagcatcc tgtcagctgt gaagtcatca aagccattgc tgataccctc tccattcctg
781 tcatagccaa cggaggatct catgaccaca tccaacagta ttcggacata gaggactttc
841 gacaagccac ggcagcctct tccgtgatgg tggcccgagc agccatgtgg aacccatcta
901 tcttcctcaa ggagggtctg cggcccctgg aggaggtcat gcagaaatac atcagatacg
961 cggtgcagta tgacaaccac tacaccaaca ccaagtactg cttgtgccag atgctacgag
1021 aacagctgga gtcgccccag ggaaggttgc tccatgctgc ccagtcttcc cgggaaattt
1081 gtgaggcctt tggccttggt gccttctatg aggagaccac acaggagctg gatgcccagc
1141 aggccaggct ctcagccaag acttcagagc agacagggga gccagctgaa gatacctctg
1201 gtgtcattaa gatggctgtc aagtttgacc ggagagcata cccagcccag atcaccccta
1261 agatgtgcct actagagtgg tgccggaggg agaagttggc acagcctgtg tatgaaacgg
1321 ttcaacgccc tctagatcgc ctgttctcct ctattgtcac cgttgctgaa caaaagtatc
1381 agtctacctt gtgggacaag tccaagaaac tggcggagca ggctgcagcc atcgtctgtc
1441 tgcggagcca gggcctccct gagggtcggc tgggtgagga gagcccttcc ttgcacaagc
1501 gaaagaggga ggctcctgac caagaccctg ggggccccag agctcaggag ctagcacaac
1561 ctggggatct gtgcaagaag ccctttgtgg ccttgggaag tggtgaagaa agccccctgg
1621 aaggctggtg actactcttc ctgccttagt cacccctcca tgggcctggt gctaaggtgg
1681 ctgtggatgc cacagcatga accagatgcc gttgaacagt ttgctggtct tgcctggcag
1741 aagttagatg tcctggcagg ggccatcagc ctagagcatg gaccaggggc cgcccagggg
1801 tggatcctgg cccctttggt ggatctgagt gacagggtca agttctcttt gaaaacagga
1861 gcttttcagg tggtaactcc ccaacctgac attggtactg tgcaataaag acacccccta
1921 ccctcaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1981 aaaaaaaaaa aaaaaaaaa
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