LOCUS BC006483 1304 bp mRNA linear HUM 06-MAR-2007
DEFINITION Homo sapiens ribosomal protein L3, transcript variant 1, mRNA (cDNA
clone IMAGE:2905497), complete cds.
ACCESSION BC006483
VERSION BC006483.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1304)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1304)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (09-APR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 9 Row: g Column: 24
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 16507968
This clone has the following problem: The cds is short compared to
the longest cds in the locus.
FEATURES Location/Qualifiers
source 1..1304
/db_xref="H-InvDB:HIT000032866"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:2905497"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_20"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1304
/gene="RPL3"
/gene_synonym="TARBP-B"
/db_xref="GeneID:6122"
/db_xref="HGNC:HGNC:10332"
/db_xref="MIM:604163"
CDS 14..1225
/gene="RPL3"
/gene_synonym="TARBP-B"
/codon_start=1
/product="ribosomal protein L3, isoform a"
/protein_id="AAH06483.1"
/db_xref="GeneID:6122"
/db_xref="HGNC:HGNC:10332"
/db_xref="MIM:604163"
/translation="MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLT
AFLGYKAGMTHIVREVDRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTF
KTVFAEHISDECKRRFYKNWHKSKKKAFTKYCKKWQDEDGKKQLEKDFSSMKKYCQVI
RVIAHTQMRLLPLRQKKAHLMEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMID
VIGVTKGKGYKGVTSRWHTKKLPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHH
RTEINKKIYKIGQGYLIKDGKLIKNNASTDYDLSDKSINPLGGFVHYGEVTNDFVMLK
GCVVGTKKRVLTLRKSLLVQTKRRALEKIDLKFIDTTSKFGHGRFQTMEEKKAFMGPL
KKDRIAKEEGA"
BASE COUNT 357 a 316 c 377 g 254 t
ORIGIN
1 atttgatggc gtgatgtctc acagaaagtt ctccgctccc agacatgggt ccctcggctt
61 cctgcctcgg aagcgcagca gcaggcatcg tgggaaggtg aagagcttcc ctaaggatga
121 cccatccaag ccggtccacc tcacagcctt cctgggatac aaggctggca tgactcacat
181 cgtgcgggaa gtcgacaggc cgggatccaa ggtgaacaag aaggaggtgg tggaggctgt
241 gaccattgta gagacaccac ccatggtggt tgtgggcatt gtgggctacg tggaaacccc
301 tcgaggcctc cggaccttca agactgtctt tgctgagcac atcagtgatg aatgcaagag
361 gcgtttctat aagaattggc ataaatctaa gaagaaggcc tttaccaagt actgcaagaa
421 atggcaggat gaggatggca agaagcagct ggagaaggac ttcagcagca tgaagaagta
481 ctgccaagtc atccgtgtca ttgcccacac ccagatgcgc ctgcttcctc tgcgccagaa
541 gaaggcccac ctgatggaga tccaggtgaa cggaggcact gtggccgaga agctggactg
601 ggcccgcgag aggcttgagc agcaggtacc tgtgaaccaa gtgtttgggc aggatgagat
661 gatcgacgtc atcggggtga ccaagggcaa aggctacaaa ggggtcacca gtcgttggca
721 caccaagaag ctgccccgca agacccaccg aggcctgcgc aaggtggcct gtattggggc
781 atggcatcct gctcgtgtag ccttctctgt ggcacgcgct gggcagaaag gctaccatca
841 ccgcactgag atcaacaaga agatttataa gattggccag ggctacctta tcaaggacgg
901 caagctgatc aagaacaatg cctccactga ctatgaccta tctgacaaga gcatcaaccc
961 tctgggtggc tttgtccact atggtgaagt gaccaatgac tttgtcatgc tgaaaggctg
1021 tgtggtggga accaagaagc gggtgctcac cctccgcaag tccttgctgg tgcagacgaa
1081 gcggcgggct ctggagaaga ttgaccttaa gttcattgac accacctcca agtttggcca
1141 tggccgcttc cagaccatgg aggagaagaa agcattcatg ggaccactga agaaagaccg
1201 aattgcaaag gaagaaggag cttaatgcca ggaacagatt ttgcagttgg tggggtctca
1261 ataaaagtta ttttccactg aaaaaaaaaa aaaaaaaaaa aaag
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