LOCUS BC006436 3059 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens zinc finger protein 559, mRNA (cDNA clone MGC:13105
IMAGE:3957973), complete cds.
ACCESSION BC006436
VERSION BC006436.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3059)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3059)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (09-APR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 18 Row: m Column: 14
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 23618925.
FEATURES Location/Qualifiers
source 1..3059
/db_xref="H-InvDB:HIT000032833"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:13105 IMAGE:3957973"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_21"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..3059
/gene="ZNF559"
/gene_synonym="MGC13105"
/gene_synonym="Nbla00121"
/db_xref="GeneID:84527"
/db_xref="HGNC:HGNC:28197"
CDS 648..2264
/gene="ZNF559"
/gene_synonym="MGC13105"
/gene_synonym="Nbla00121"
/codon_start=1
/product="zinc finger protein 559"
/protein_id="AAH06436.1"
/db_xref="GeneID:84527"
/db_xref="HGNC:HGNC:28197"
/translation="MVAGWLTNYSQDSVTFEDVAVDFTQEEWTLLDQTQRNLYRDVML
ENYKNLVAVDWESHINTKWSAPQQNFLQGKTSSVVEMERNHFGEELFDFNQCEKALSE
HSCLKTHRRTYFRKKTCECNQCEKAFRKPSIFTLHKKTDIGEELPNCNQCETAFSQHL
HLVCKKTSQNLHLVCKKTHTQEKPYKCSDCEKGLPSSSHLRECVRIYGGERPYTHKEY
VETFSHSTALFVHMQTQDGEKFYECKACGKPFTESSYLTQHLRTHSRVLPIEHKKFGK
AFAFSPDLAKHIRLRTRGKHYVCNECGKEFTCFSKLNIHIRVHTGEKPYECNKCGKAF
TDSSGLIKHRRTHTGEKPYECKECGKAFANSSHLTVHMRTHTGEKPYQCKECGKAFIN
SSSFKSHMQTHPGVKPYDCQQCGKAFIRSSFLIRHLRSHSAERPFECEECGKAFRYSS
HLSQHKRIHTGERPYKCQKCGQAFSISSGLTVHMRTHTGERPFECQECGKAFTRSTYL
IRHLRSHSVEKPYKECGQTFSNSSCLTECV"
BASE COUNT 930 a 622 c 694 g 813 t
ORIGIN
1 gttcggtggt gtcccggtgc agccacgcga gagtagaagg gtggaaaggg gaggtgccca
61 gtgaaatgga gcctgtcccg tgcactttcg ggcatttcga gcatcttgtg ggctctccca
121 agtcgcggcc cctcctctga gagccacagt caggtctgtc ctcaggggtc gaggcggctg
181 cgctggggcc tcggcccggg aggaggcggg gggcacggcc tttccatttt ccctgctccc
241 ctctgcagaa gcctcatagg gcccggcgcg gcggctcacg cctgtcattc ccagcgcttt
301 gggcggattg ggtaggagga ttacttgagg ccaggagttc aagaccaggc agggcaacat
361 agggagaccc cccccccaac catctctaat ggaaaaaaaa aaaaaagtct ccacatccag
421 cgttgtgcct tttctctata aggaacagca tctctgcctt cctgttcacg gtgaccttcg
481 cttggtgtcc tcctggcctc agcaacctga caattctgtc gtgtcccgag agatggctaa
541 tgaatggcgc ttgatgacag atgagtaatg cctgttgctg aaagattgac gatcatcttt
601 ctcaagatgt tttctgtctt catgagtcaa aatttgaaga ggaaaggatg gtggctgggt
661 ggttgacaaa ttactctcag gactcagtga cctttgagga tgtggctgtg gacttcaccc
721 aggaggagtg gactttgctg gatcaaactc agagaaactt atacagagat gtgatgctgg
781 agaactataa gaatctagtt gcagtagatt gggagagtca tattaatacc aaatggtcag
841 cacctcagca gaattttttg caggggaaaa catccagtgt ggtggaaatg gagagaaacc
901 attttggaga ggaactgttt gactttaacc aatgtgaaaa agccttgagt gaacactcat
961 gccttaagac tcacaggaga acttacttta gaaagaaaac ctgtgagtgt aatcaatgtg
1021 aaaaagcctt cagaaaaccc tctatcttta ctttacacaa gaaaactgat atcggagagg
1081 aacttcctaa ctgtaatcaa tgtgaaacag ccttcagcca acatctacat cttgtttgca
1141 agaaaactag ccaaaatcta catcttgttt gcaagaaaac tcacactcaa gagaaaccat
1201 ataaatgcag tgactgtgaa aaaggcttac cttcctcctc acacctcaga gaatgtgtaa
1261 gaatttatgg tggagagaga ccatatactc ataaggagta tgtcgaaacc ttttctcatt
1321 ctacagccct ttttgtacac atgcaaactc aagatggaga aaaattctat gaatgtaaag
1381 catgtgggaa acccttcact gagtcgtcat atcttactca acatttaaga actcatagta
1441 gagtgttacc tatagaacat aagaaatttg gcaaagcctt tgctttttcc ccagatcttg
1501 ctaaacatat aagacttaga actagaggaa aacactatgt ttgtaatgaa tgtggcaaag
1561 aatttacttg tttctcaaaa ctcaacattc acataagggt tcacactgga gaaaaaccgt
1621 atgagtgcaa caaatgtggg aaagccttca ctgattcatc aggtcttata aaacacaggc
1681 gaactcacac tggagaaaag ccttatgaat gtaaggaatg tgggaaagct tttgctaact
1741 cttcacatct tactgtacat atgagaactc acactggtga gaagccttat caatgtaagg
1801 aatgtggaaa agcctttatt aattcctctt cctttaaaag tcacatgcag actcatcctg
1861 gtgtaaaacc ctatgactgt caacagtgtg ggaaagcctt cattcgatcc tcatttctta
1921 ttcgacattt gagaagtcac agtgcagaaa ggccttttga atgtgaggaa tgtgggaaag
1981 cctttagata ctcctcgcac cttagtcaac ataaaagaat acatacaggg gagaggccat
2041 ataaatgtca aaagtgtggg caagccttca gtatctcatc aggccttaca gtacacatga
2101 gaactcacac tggtgaacgg ccctttgaat gtcaggaatg tgggaaagcc tttactcggt
2161 ccacatatct tattcgacat ctaagaagtc atagtgtgga gaaaccatat aaggaatgtg
2221 ggcaaacctt tagtaattcc tcatgcctta ctgaatgtgt gtgaattggg gctgatactt
2281 ggaaagaatg tggtaaagcc actacttcct cacacttact gaacatgtac tcattcatag
2341 tggcaatgta cacagtcata aggaatgtgg gaagccttcc ttggtgtctc agatcttaac
2401 aattccaata gaagagaaga catatgaatg taaggaatgt gggaaaatct tggctccttc
2461 cataggcctt actattcatg tgtctgtgca tcctaggaaa caaactgaac gtaggaaacc
2521 tgtcgatgct tacatcttac tgagtctgtt tgaactcatg ctggagagaa atgctatgaa
2581 tgtgaggaag gtggaaaagc tttcattatt ttcctcgggc cttactgagc ttgtgagcac
2641 attggatata aatgcacgtc ctctggctgt aaggaatgtg ttgaaacctt tcactctgcc
2701 ttatacctta atattcagct gtgatctcac aagtgtgaaa aatcttatga atgtaaaatg
2761 tgtggagatt cttctttgtt tttagcttcc actttgggaa catgtcaaag cacacattga
2821 gaagtcccat gagtgaaaga gatgttggaa agcccttgaa cttggtcgtt aggaaacatc
2881 cacactgaag aggaacctga ctgtatggaa ggtcaaaaag gctgtattaa tttacatgca
2941 aaaagtcaca ctagaggaat gccatatcag aatgcttttg gtaaatatac atgttttaaa
3001 gaggttatat atcattaata aaaatatcta gctggtctga aaaaaaaaaa aaaaaaaaa
//