LOCUS BC006429 1460 bp mRNA linear HUM 09-MAR-2007 DEFINITION Homo sapiens coiled-coil domain containing 115, mRNA (cDNA clone MGC:12981 IMAGE:3350642), complete cds. ACCESSION BC006429 VERSION BC006429.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1460) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1460) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (09-APR-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 18 Row: c Column: 24 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 21362049. FEATURES Location/Qualifiers source 1..1460 /db_xref="H-InvDB:HIT000032829" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:12981 IMAGE:3350642" /tissue_type="Eye, retinoblastoma" /clone_lib="NIH_MGC_16" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..1460 /gene="CCDC115" /gene_synonym="ccp1" /db_xref="GeneID:84317" /db_xref="HGNC:HGNC:28178" CDS 21..563 /gene="CCDC115" /gene_synonym="ccp1" /codon_start=1 /product="coiled-coil domain containing 115" /protein_id="AAH06429.2" /db_xref="GeneID:84317" /db_xref="HGNC:HGNC:28178" /translation="MAALDLRAELDSLVLQLLGDLEELEGKRTVLNARVEEGWLSLAK ARYAMGAKSVGPLQYASHMEPQVCLHASEAQEGLQKFKVVRAGVHAPEEVGPREAGLR RRKGPTKTPEPESSEAPQDPLNWFGILVPHSLRQAQASFRDGLQLAADIASLQNRIDW GRSQLRGLQEKLKQLEPGAA" BASE COUNT 358 a 360 c 384 g 358 t ORIGIN 1 ccagatctgg aggtgtgtcc atggcggcgc ttgacctgcg agcggagctg gattcgctgg 61 tcctgcagct gcttggggac ctggaggagc tggaggggaa acgaacggtg ttgaacgccc 121 gggtggagga gggctggctc tcgctcgcca aggctcgcta cgcgatgggc gccaagtcgg 181 tagggcccct gcagtatgct tcccacatgg agccccaggt ctgcctccac gccagcgagg 241 cccaggaggg actccagaag ttcaaggtgg tgagagctgg tgtccacgcc ccagaggagg 301 tggggcctcg cgaagcaggt ctgcggaggc gcaagggccc cactaagacc ccagaaccgg 361 agtcctctga ggcccctcag gaccccctga actggtttgg aatcctagtt cctcacagtc 421 tacgtcaggc tcaagcaagc ttccgggatg gcctgcagct ggccgcagac atagccagcc 481 tccagaaccg cattgactgg ggtcgaagcc agctccgggg actccaagag aaactcaagc 541 agctggagcc tggggctgcc tgacatgcgc gcaaagaggc agggcagcga gcacagctgt 601 tctccgacat ggctacgtga tctcaggcct tcttccttca caattagctc ttgcccctac 661 cccacgccag ctaatgcccc ttctgtgtcc ctgctctgca tgtttccatt ttccttaggt 721 gtgaagtttg aagaggcaaa cagtaatttt gaaagccact actttgaaac cattctaagg 781 cctgagttcc cataggacac actcacatag gcaggtacac gttagtcaac aattggaact 841 gcctcttgga tcactcagct gtgctttcat ggctggatga tggaacactg tgcgaagaga 901 gatgggggcc aggaagtagc gcttcatgct tagtacatcc tccaaattgt ctttgctgga 961 ggagaaaacc gtactcagcc aaaagatcag gacaatatga cttgagtcca caaggacaca 1021 aacacctgag tagctgggca gcccttggca gggtctaagc caggaagtaa aaatgatctg 1081 gcctagatat ttaagggaac tctaggaaga ggcctaggtt tttaaaatcc tgtctctttg 1141 tcttaccata agaggctgag cctctcttca tttttttgaa gggccacttg tgttttctgt 1201 tctgggaact tcattcattt ttctactggg ttgttgatct ttgcagtaat ttctaggagc 1261 tgtttatgtt tggaggtaat tggtcctttg tccatatata tgagatgtaa gtcttatttt 1321 ccagtttatc tttttgctta ttttttttga ctttttattg taaaataaaa catcaaactg 1381 cacagaacag ttgaatagct taatgaataa ctacagtaaa agctatggta accactaccc 1441 aaaaaaaaaa aaaaaaaaaa //