LOCUS BC006410 1948 bp mRNA linear HUM 15-NOV-2004 DEFINITION Homo sapiens ubiquilin 4, mRNA (cDNA clone IMAGE:2988342), complete cds. ACCESSION BC006410 VERSION BC006410.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1948) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1948) AUTHORS Director MGC Project. TITLE Direct Submission JOURNAL Submitted (09-APR-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Cancer Genomics Office, National Cancer Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Steve Jones, Sarah Barber, Mabel Brown-John, Yaron Butterfield, Andy Chan, Steve S. Chand, William Chow, Alison Cloutier, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Amara Masson, Mike R. Mayo, Josh Moran, Ryan Morin, Teika Olson, Diana Palmquist, Anca Petrescu, Anna Liisa Prahbu, Parvaneh Saeedi, JR Santos, Angelique Schnerch, Ursula Skalska, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 13 Row: k Column: 1 This clone has the following problem: The cds is short compared to the longest cds in the locus. FEATURES Location/Qualifiers source 1..1948 /db_xref="H-InvDB:HIT000032816" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:2988342" /tissue_type="Colon, adenocarcinoma" /clone_lib="NIH_MGC_15" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..1948 /gene="UBQLN4" /gene_synonym="A1U" /gene_synonym="C1orf6" /gene_synonym="UBIN" /db_xref="GeneID:56893" /db_xref="MIM:605440" CDS 17..205 /gene="UBQLN4" /gene_synonym="A1U" /gene_synonym="C1orf6" /gene_synonym="UBIN" /codon_start=1 /product="UBQLN4 protein" /protein_id="AAH06410.1" /db_xref="GeneID:56893" /db_xref="MIM:605440" /translation="MIQLLAGSGNSQVQTPEVRFQQQLEQLNSMGFINREANLQALIA TGGDINAAIERLLGSQLS" BASE COUNT 500 a 474 c 477 g 497 t ORIGIN 1 gcaactcatg cagcagatga tccagctttt ggctggaagt ggaaactcac aggtgcagac 61 gccagaagtg agatttcagc agcagctgga gcagctcaac tccatgggct tcatcaatcg 121 tgaggctaac ctgcaggccc tgattgccac aggaggggac atcaacgcag ctatcgagag 181 actgctgggc tcccagctct cctaatccct cggcccatgc ctcctgcctc tcccctccct 241 cgatgtcagc attcggttct tctgtcaatc cttaccctct gcagcttgtc ctcccttccg 301 tcttctccct catcctttcc aaacagcagg gtgactttag aggcatgggc tccaacccct 361 tagctctgtc tgagaattat ggttttactg ctacgtctct aacagactct tctctcctgg 421 tctccttgag cagtgctact taaacagttt tcacagtttc attgattgac tctacctcct 481 tgccccacac cacttttgca atctttaaac tttcagtggc tgtgcagagt cgagggagga 541 accagctctc tggtttactg gaacatagtc ttccatctat accactaggg ttttgtctta 601 tgtttacttt tggtaactct cttccttctt tttctcccta ccccccaacc cctagcccaa 661 ccaatgctag aatttcttgc tctgaaggag gagcaggtga aacaggtggt aattttcctt 721 ctcggcccct attctggttc attcagcact ttttggtggg aactgttgga aattccaggg 781 taaggaggaa gatgcctgtt ctccctgtct gaagagggag atgagacagc tctctggaca 841 ggaattaaca aacgctggag cagcccagag gaaattcgtg tgaaagagga gggaatgaga 901 ttattcggag gaagggaatg ggggagacag cctgagtaaa aggcttggaa gttggaatta 961 gcagtgggga gcagaagcac tcatagctct tttaggcaga agaatccagg cccgagctgg 1021 cagaagagac ttagagatgc taatggaatt taaactgaaa aaaggagccc aatgaagcta 1081 agcgccacgc cccacaaggg gtcatattgg ctttagttcc tcaagcatat gtgcttatat 1141 gcacacacac acacatttcc atggacccag gtcttgcttg tgtccccagg caccagtagt 1201 ttgagccccc ctcaaaagac atgaaggggg ttggggtctg tgtgagtagt ggggaggtgc 1261 atgtgtatcc acatgtgtgc atacactctt aagttgggtg ggaagtggat tccttgttgg 1321 tttctggttc agagtgctct cccaccacca gagacaagtg ggtaaaaagg tcagtccatt 1381 gcaggaatat atatccggga gagctaggtc ccttggggct ctggatgctg ggtaacccag 1441 aggtaatgtg ggtacccttt ctgaagctgt cagggctgtg actagcaccc ttatcacccc 1501 tcactgcctt gtgggaatag tagagggttt ttttcctcca gagcccctgg cttttcagtt 1561 cttaactatt tccctccagg ccagaaagtt ttctttgagg aaggagagga gagggtggca 1621 atgatgcctt tgatctggaa ttggacattt ctctgtcaga gcacagagga ggctcatatc 1681 acctcttccc tctcctactt ggcccagctg cttggaggac cgaccccatg gctgagaata 1741 tgacggcaag aggaacagag tttgctccaa gtgggaaagg gtcccaagca gtccagagaa 1801 gatgtctgtg tggctttccc tccctgcctc ccccagctcc cacactggcc tttgtaaata 1861 aatggcgtgg tctttgttgt gaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa 1921 aaaaaaaaaa aaaaaaaaaa aaaaaaac //