LOCUS BC006407 554 bp mRNA linear HUM 06-JAN-2006
DEFINITION Homo sapiens LSM domain containing 1, mRNA (cDNA clone MGC:14151
IMAGE:3690202), complete cds.
ACCESSION BC006407
VERSION BC006407.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 554)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 554)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (09-APR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC006407.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 20 Row: b Column: 20
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 40254987.
FEATURES Location/Qualifiers
source 1..554
/db_xref="H-InvDB:HIT000032814"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:14151 IMAGE:3690202"
/tissue_type="Uterus, endometrium adenocarcinoma"
/clone_lib="NIH_MGC_44"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..554
/gene="LSMD1"
/gene_synonym="MGC14151"
/gene_synonym="PFAAP2"
/db_xref="GeneID:84316"
/db_xref="HGNC:HGNC:28212"
/db_xref="IMGT/GENE-DB:28212"
/db_xref="MIM:28212"
CDS 100..477
/gene="LSMD1"
/gene_synonym="MGC14151"
/gene_synonym="PFAAP2"
/codon_start=1
/product="LSMD1 protein"
/protein_id="AAH06407.1"
/db_xref="GeneID:84316"
/db_xref="HGNC:HGNC:28212"
/db_xref="IMGT/GENE-DB:28212"
/db_xref="MIM:28212"
/translation="MAGAGPTMLLREENGCCSRRQSSSSAGDSDGEREDSAAERARQQ
LEALLNKTMRIRMTDGRTLVGCFLCTDRDCNVILGSAQEFLKPSDSFSAGEPRVLGLA
MVPGHHIVSIEVQRESLTGPPYL"
BASE COUNT 142 a 148 c 168 g 96 t
ORIGIN
1 cgcgaaagga aagaggtcgg gagcgctcgc gagatctcgg accacccaac ctgaaaggtg
61 cttaggaagt tgaaaggccc agaggaggcc tccgggcaaa tggccggagc tggaccgacc
121 atgctgctac gagaagagaa tggctgttgc agtcggcgtc agagcagctc cagtgctggg
181 gattcggacg gagagcgcga ggactcggcg gctgagcgcg cccgacagca gctagaggcg
241 ctgctcaaca agactatgcg cattcgcatg acagatggac ggacactggt cggctgcttc
301 ctctgcactg accgtgactg caatgtcatc ctgggctcgg cgcaggagtt cctcaagccg
361 tcggattcct tctctgccgg ggagccccgt gtgctgggcc tggccatggt acccggacac
421 cacatcgttt ccattgaggt gcagagggag agtctgaccg ggcctccgta tctctgacca
481 cgatggcgct tacctttcag acttcattaa acttatgacc gaaaaaaaaa aaaaaaaaaa
541 aaaaaaaaaa aaaa
//