LOCUS BC006404 3131 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens ClpB caseinolytic peptidase B homolog (E. coli), mRNA (cDNA clone MGC:13160 IMAGE:4304523), complete cds. ACCESSION BC006404 VERSION BC006404.2 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3131) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 3131) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (09-APR-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Aug 20, 2003 this sequence version replaced BC006404.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 17 Row: p Column: 21 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 34147523. FEATURES Location/Qualifiers source 1..3131 /db_xref="H-InvDB:HIT000032812" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:13160 IMAGE:4304523" /tissue_type="Uterus, leiomyosarcoma" /clone_lib="NIH_MGC_46" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..3131 /gene="CLPB" /gene_synonym="FLJ13152" /gene_synonym="HSP78" /gene_synonym="SKD3" /db_xref="GeneID:81570" /db_xref="HGNC:HGNC:30664" CDS 51..2174 /gene="CLPB" /gene_synonym="FLJ13152" /gene_synonym="HSP78" /gene_synonym="SKD3" /codon_start=1 /product="ClpB caseinolytic peptidase B homolog (E. coli)" /protein_id="AAH06404.1" /db_xref="GeneID:81570" /db_xref="HGNC:HGNC:30664" /translation="MLGSLVLRRKALAPRLLLRLLRSPTLRGHGGASGRNVTTGSLGE PQWLRVATGGRPGTSPALFSGRGAATGGRQGGRFDTKCLAAATWGRLPGPEETLPGQD SWNGVPSRAGLGMCALAAALVVHCYSKSPSNKDAALLEAARANNMQEVSRLLSEGADV NAKHRLGWTALMVAAINRNNSVVQVLLAAGADPNLGDDFSSVYKTAKEQGIHSLEDGG QDGASRHITNQWTSALEFRRWLGLPAGVLITREDDFNNRLNNRASFKGCTALHYAVLA DDYRTVKELLDGGANPLQRNEMGHTPLDYAREGEVMKLLRTSEAKYQEKQRKREAEER RRFPLEQRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELAK QTAKYMHKDAKKGFIRLDMSEFQERHEVAKFIGSPPGYVGHEEGGQLTKKLKQCPNAV VLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQHALQ LRQEALEMSRNRIAENLGDVQISDKITISKNFKENVIRPILKAHFRRDEFLGRINEIV YFLPFCHSELIQLVNKELNFWAKRAKQRHNITLLWDREVADVLVDGYNVHYGARSIKH EVERRVVNQLAAAYEQDLLPGGCTLRITVEDSDKQLLKSPELPSPQAEKRLPKLRLEI IDKDSKTRRLDIRAPLHPEKVCNTI" BASE COUNT 769 a 882 c 878 g 602 t ORIGIN 1 gtggtcagca caggggccgg caccacgggg ttatcgaagc agctgtcaag atgctggggt 61 ccctggtgtt gaggagaaaa gcactggcgc cacggctact cctccggctg ctcaggtccc 121 caacgctccg gggccatgga ggtgcttccg gccggaatgt gactactggg agtctcgggg 181 agccgcagtg gctgagggta gccaccgggg ggcgccctgg aacatcgccg gccttgttct 241 ccggacgtgg ggcagccacc ggggggcgcc agggaggacg cttcgatacc aaatgcctcg 301 cggctgccac ttggggacgc cttcctggtc ccgaagaaac actcccagga caggacagct 361 ggaacggggt ccccagcagg gccggactgg gcatgtgcgc cctggccgca gcgctggtgg 421 ttcattgcta cagcaagagt ccgtccaaca aggatgcagc cctgttggaa gctgcccgtg 481 ccaacaatat gcaagaagtc agcaggctgt tgtcagaagg tgcagatgtc aatgcaaagc 541 acagacttgg ctggacagca ctcatggtgg cagccatcaa ccgaaacaac agtgtggtac 601 aggtcctgct tgctgctggg gctgatccaa accttggaga tgatttcagc agtgtttaca 661 agactgccaa ggaacaggga atccattctt tggaagatgg gggacaggac ggtgcaagcc 721 ggcacatcac aaaccagtgg acaagtgccc tggagttcag gagatggcta ggactccccg 781 ctggcgtcct gatcacccga gaggatgact tcaacaacag gctgaacaac cgcgccagtt 841 tcaagggctg cacggccttg cactatgctg ttcttgctga tgactaccgc actgtcaagg 901 agctgcttga tggaggagcc aaccccctgc agaggaatga aatgggacac acacccttgg 961 attatgcccg agaaggggaa gtgatgaagc ttctgaggac ttctgaagcc aagtaccaag 1021 agaagcagcg gaagcgtgag gctgaggagc ggcgccgctt ccccctggag cagcgactaa 1081 aggagcacat cattggccag gagagcgcca tcgccacagt gggtgctgcg atccggagga 1141 aggagaatgg ctggtacgat gaagaacacc ctctggtctt cctcttcttg ggatcatctg 1201 gaataggaaa aacagagctg gccaagcaga cagccaaata tatgcacaaa gatgctaaaa 1261 agggcttcat caggctggac atgtccgagt tccaggagcg acacgaggtg gccaagttta 1321 ttgggtctcc accaggctac gttggccatg aggagggtgg ccagctgacc aagaagttga 1381 agcagtgccc caatgctgtg gtgctctttg atgaagtaga caaggcccat ccagatgtgc 1441 tcaccatcat gctgcagctg tttgatgagg gccggctgac agatggaaaa gggaagacca 1501 ttgattgcaa ggacgccatc ttcatcatga cctccaatgt ggccagcgac gagatcgcac 1561 agcacgcgct gcagctgagg caggaagctt tggagatgag ccgtaaccgt attgccgaaa 1621 acctggggga tgtccagata agtgacaaga tcaccatctc aaagaacttc aaggagaatg 1681 tgattcgccc tatcctgaaa gctcacttcc ggagggatga gtttctggga cggatcaatg 1741 agatcgtcta cttcctcccc ttctgccact cggagctcat ccaactcgtc aacaaggaac 1801 taaacttctg ggccaagaga gccaagcaaa ggcacaacat cacgctgctc tgggaccgcg 1861 aggtggcaga tgtgctggtc gacggctaca atgtgcacta tggcgcccgc tccatcaaac 1921 atgaggtaga acgccgtgtg gtgaaccagc tggcagcagc ctatgagcag gacctgctgc 1981 cagggggctg tactttgcgc atcacggtgg aggactcaga caagcagcta ctcaaaagcc 2041 cagaactgcc ctcaccccag gctgagaagc gcctccccaa gctgcgtctg gagatcatcg 2101 acaaggacag caagactcgc agactggaca tccgggcacc actgcaccct gagaaggtgt 2161 gcaacaccat ctagcagcca cctgcctgct cctatgtgcc ctcaccatcc aataaaggcc 2221 ccttggctgt ggcatggcaa ctgacttacc ttcccctcat gccgctccca tctctaccca 2281 gtctcaggcc tgcttacctc ctcacagccc atgaagaccc cttctcagcc ccaaaacctg 2341 aaggaggaat ttcgccctac tctggcccct ttgttgtggg cccataacct gctaacaagc 2401 cttcaggaga ggagctgcct ttccaccccc ttcaaggcaa ggagggatgg aggtccctta 2461 tttccttcag aatgatcccc atcccccata gtcgccagac tttctcatgt tcccaggaag 2521 ctcagaagta tggcagctaa gaacacagct ggctggaaga agacagggac cagactgaac 2581 tgccaccctc tgctagtcct catgcaactc agtccccaga atggctccac tgggagtgga 2641 ggaagagctc agaggcccag gtgcagatag ttctgcaatt tagtctgtag cctcctcgtt 2701 ccctacccta aaattctaag gggaagggac ccatagaggc ttgcctgttt ccgctactat 2761 attatgccca gtgttcctcc tcaccccacg tcctggggtc aggccagacc atgtttcgtc 2821 agccttgggg actaggccag tgttgggcac ctccaggagg aggcctgact ggttcattac 2881 cctcccctac tcagactgag cagcagtccc agataaccaa gcaagctcag ctctgtgggg 2941 gcctccttca aaagaccaac atcgcagaca ttaggaagct gtaggaagag agatcatggg 3001 tttgacctct gcccacatgg ccatggagtc agcctcagcc ctgtctgtac tgctcgtcca 3061 gctaaacgag cctggaataa acatgcagtt tattcagtct gcatgttagt cacaaaaaaa 3121 aaaaaaaaaa a //