LOCUS BC006399 1510 bp mRNA linear HUM 27-OCT-2006
DEFINITION Homo sapiens reticulon 4 interacting protein 1, mRNA (cDNA clone
MGC:12934 IMAGE:4309263), complete cds.
ACCESSION BC006399
VERSION BC006399.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1510)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1510)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (09-APR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC006399.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Louis Staudt
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 17 Row: p Column: 5
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 47519419.
FEATURES Location/Qualifiers
source 1..1510
/db_xref="H-InvDB:HIT000032808"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:12934 IMAGE:4309263"
/tissue_type="Primary B-Cells from Tonsils"
/clone_lib="NIH_MGC_48"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1510
/gene="RTN4IP1"
/gene_synonym="MGC12934"
/gene_synonym="NIMP"
/db_xref="GeneID:84816"
/db_xref="HGNC:HGNC:18647"
/db_xref="MIM:610502"
CDS 273..1463
/gene="RTN4IP1"
/gene_synonym="MGC12934"
/gene_synonym="NIMP"
/codon_start=1
/product="reticulon 4 interacting protein 1"
/protein_id="AAH06399.2"
/db_xref="GeneID:84816"
/db_xref="HGNC:HGNC:18647"
/db_xref="MIM:610502"
/translation="MEFLKTCVLRRNACTAVCFWRSKVVQKPSVRRISTTSPRSTVMP
AWVIDKYGKNEVLRFTQNMMMPIIHYPNEVIVKVHAASVNPIDVNMRSGYGATALNMK
RDPLHVKIKGEEFPLTLGRDVSGVVMECGLDVKYFKPGDEVWAAVPPWKQGTLSEFVV
VSGNEVSHKPKSLTHTQAASLPYVALTAWSAINKVGGLNDKNCTGKRVLILGASGGVG
TFAIQVMKAWDAHVTAVCSQDASELVRKLGADDVIDYKSGSVEEQLKSLKPFDFILDN
VGGSTETWAPDFLKKWSGATYVTLVTPFLLNMDRLGIADGMLQTGVTVGSKALKHFWK
GVHYRWAFFMASGPCLDDIAELVDAGKIRPVIEQTFPFSKVPEAFLKVERGHARGKTV
INVV"
BASE COUNT 443 a 272 c 372 g 423 t
ORIGIN
1 aagtggaggg ggtgaaagtg agggaggaga atggacagaa tactgactgg aacgttaatt
61 cgagcatttc atatgcgaag agcggaataa cagttccgta ttcttctttc agtttctcca
121 ttagattagc ttcattttcg aatgctccgt tttgcatgct taattttgaa actagcccgt
181 ggtttggcag aatttgactg aattcagggg tgagagtttg atccagtcca agtgtatttg
241 aatttgagca cgcagttcaa ccagtgttta caatggaatt tctgaagact tgtgtactta
301 gaagaaatgc atgcactgcg gtttgcttct ggagaagcaa agttgtccaa aagccttcag
361 ttagaaggat tagtactacc tctcctagga gcactgtcat gcctgcttgg gtgatagata
421 aatatgggaa gaatgaagtg cttcgattca ctcagaacat gatgatgcct atcatacact
481 atccaaatga agtcattgtc aaagttcacg ctgccagtgt aaatcctata gacgttaata
541 tgagaagtgg ttatggagct acagctttaa atatgaagcg tgatccttta cacgtgaaaa
601 tcaaaggaga agaatttcct ctgactctgg gtcgggatgt ctctggcgtg gtgatggaat
661 gtgggcttga tgtgaaatac ttcaagcctg gagatgaggt ctgggctgca gttcctcctt
721 ggaaacaagg cactctttca gagtttgttg tagtcagtgg gaatgaggtc tctcacaaac
781 ccaaatcact cactcatact caagctgcct ctttgccata tgtggctctc acagcctggt
841 ctgctataaa caaagttggt ggcctgaatg acaagaattg cacaggaaaa cgtgttctaa
901 tcttaggcgc ttcaggcgga gttggtactt ttgctataca ggtaatgaaa gcatgggatg
961 ctcatgtgac agcagtttgc tcccaagatg ccagtgaact tgtaaggaag cttggtgcag
1021 acgatgtaat tgattacaaa tctggaagtg tggaagagca gttgaaatcc ttaaaaccat
1081 ttgattttat ccttgataat gttggcggat ccactgaaac atgggctcca gattttctca
1141 agaaatggtc aggagccacc tatgtgactt tggtgactcc tttcctcctg aacatggacc
1201 gattgggcat agcagatggc atgttgcaga caggagtcac tgtaggttca aaggcattaa
1261 agcatttctg gaaaggagtc cattatcgct gggcattttt catggccagt ggcccatgtt
1321 tagatgacat tgcagaactg gtggatgcgg gaaagatccg gccagttatt gaacaaacct
1381 ttcctttttc taaagttcca gaagccttcc tgaaggtgga aagaggacac gcacgaggaa
1441 agactgtaat taatgttgtt taaataaaaa tgcagtttag tgaaaaaaaa aaaaaaaaaa
1501 aaaaaaaaaa
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