LOCUS BC006336 1140 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens ventral anterior homeobox 2, mRNA (cDNA clone
MGC:12577 IMAGE:4304066), complete cds.
ACCESSION BC006336
VERSION BC006336.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1140)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1140)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (09-APR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Dec 9, 2003 this sequence version replaced BC006336.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 17 Row: o Column: 21
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 7110734.
FEATURES Location/Qualifiers
source 1..1140
/db_xref="H-InvDB:HIT000032767"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:12577 IMAGE:4304066"
/tissue_type="Uterus, leiomyosarcoma"
/clone_lib="NIH_MGC_46"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1140
/gene="VAX2"
/gene_synonym="DRES93"
/db_xref="GeneID:25806"
/db_xref="HGNC:HGNC:12661"
/db_xref="MIM:604295"
CDS 8..880
/gene="VAX2"
/gene_synonym="DRES93"
/codon_start=1
/product="ventral anterior homeobox 2"
/protein_id="AAH06336.1"
/db_xref="GeneID:25806"
/db_xref="HGNC:HGNC:12661"
/db_xref="MIM:604295"
/translation="MGDGGAERDRGPARRAESGGGGGRCGDRSGAGDLRADGGGHSPT
EVAGTSASSPAGSRESGADSDGQPGPGEADHCRRILVRDAKGTIREIVLPKGLDLDRP
KRTRTSFTAEQLYRLEMEFQRCQYVVGRERTELARQLNLSETQVKVWFQNRRTKQKKD
QSRDLEKRASSSASEAFATSNILRLLEQGRLLSVPRAPSLLALTPSLPGLPASHRGTS
LGDPRNSSPRLNPLSSASASPPLPPPLPAVCFSSAPLLDLPAGYELGSSAFEPYSWLE
RKVGSASSCKKANT"
BASE COUNT 232 a 388 c 349 g 171 t
ORIGIN
1 ggtcagcatg ggcgatgggg gcgccgagcg cgaccggggc cccgcgcgcc gggcggagtc
61 tggtggcggc ggtgggcgct gcggagaccg cagcggagcg ggggacttgc gagctgatgg
121 cggtggccac agcccaacgg aggtggccgg gacctcagcc tccagtcccg caggctccag
181 ggagagtgga gccgacagcg acgggcagcc cgggcccggc gaggcagacc actgccgccg
241 catactggtg cgagatgcca aagggacaat tcgggaaatt gtcctgccta agggcctgga
301 cctggaccgg cccaagcgga cacgtacatc cttcactgcc gagcagctgt accgcctgga
361 gatggagttc cagcgctgcc agtatgtggt gggccgcgag cgcactgagc tggcccgcca
421 gctgaacctc tccgagaccc aggtgaaggt ctggttccag aaccgccgca ccaagcagaa
481 gaaagaccag agcagagacc tggagaagcg ggcgtcctcc tcagcctccg aggcctttgc
541 cacctccaac attctgcggc tgctggagca gggccggctg ctctctgtgc ccagggcccc
601 tagcctcctg gcgctgaccc ctagcctgcc aggcctacct gccagccaca ggggcacctc
661 cttaggtgac cccaggaact cctccccacg cctcaacccg ctgtcctcgg cctcagcgtc
721 ccccccactg ccgccccctc tgccagctgt ctgcttttcc tcggccccgc tcctggatct
781 gcctgccggc tacgaactgg gttcctcggc cttcgagcca tacagctggc tagaacggaa
841 agtgggcagc gccagcagct gcaagaaagc taacacttaa gactcccacc ctgtgacact
901 gagtcccgag cacagcacct tcccagtctc ctgtgcccca gcggacagca ctgagcaggc
961 cccggacagg aggggctgca gccacacact cttccccacc tgccccccag ctcagagact
1021 cgtgaccaaa tggccttggt cccgcagctt gtgtgcgtga gtgcagtgtg agtgtgtgtg
1081 tctctcactg aaataaaagg aaaacaatga caagaaggaa aaaaaaaaaa aaaaaaaaaa
//