LOCUS BC006317 2788 bp mRNA linear HUM 03-OCT-2003 DEFINITION Homo sapiens solute carrier family 18 (vesicular monoamine), member 1, mRNA (cDNA clone MGC:12717 IMAGE:4125784), complete cds. ACCESSION BC006317 VERSION BC006317.2 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2788) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2788) AUTHORS Strausberg,R. TITLE Direct Submission JOURNAL Submitted (09-APR-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Cancer Genomics Office, National Cancer Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Aug 19, 2003 this sequence version replaced BC006317.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 17 Row: g Column: 17 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 4506986. FEATURES Location/Qualifiers source 1..2788 /db_xref="H-InvDB:HIT000032752" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:12717 IMAGE:4125784" /tissue_type="Brain, neuroblastoma" /clone_lib="NIH_MGC_19" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..2788 /gene="SLC18A1" /gene_synonym="CGAT" /gene_synonym="VAT1" /gene_synonym="VMAT1" /db_xref="GeneID:6570" /db_xref="MIM:193002" CDS 381..1862 /gene="SLC18A1" /gene_synonym="CGAT" /gene_synonym="VAT1" /gene_synonym="VMAT1" /codon_start=1 /product="SLC18A1 protein" /protein_id="AAH06317.1" /db_xref="GeneID:6570" /db_xref="MIM:193002" /translation="MLRPILDAPQRLLKEGRASRQLVLVVVFVALLLDNMLFTVVVPI VPTFLYDMEFKEVNSSLHLGHAGSSPHALASPAFSTIFSFFNNNTVAVEESVPSGIAW MNDTASTIPPPATEAISAHKNNCLQGTGFLEEETTRVGVLFASKAVMQLLVNPFVGPL TNRIGYHIPMFAGFVIMFLSTVMFAFSGTYTLLFVARTLQGIGSSFSSVAGLGMLASV YTDDHERGRAMGTALGGLALGLLVGAPFGSVMYEFVGKSAPFLILAFLALLDGALQLC ILQPSKVSPESAKGTPLFMLLKDPYILVAAGLAFLPASVSYLIGTNLFGVLANKMGRW LCSLIGMLVVGTSLLCVPLAHNIFGLIGPNAGLGLAIGMVDSSMMPIMGHLVDLRHTS VYGSVYAIADVAFCMGFAIGPSTGGAIVKAIGFPWLMVITGVINIVYAPLCYYLRSPP AKEEKLAILSQDCPMETRMYATQKPTKEFPLGEDSDEEPDHEE" misc_feature 765..1010 /gene="SLC18A1" /gene_synonym="CGAT" /gene_synonym="VAT1" /gene_synonym="VMAT1" /note="sugar_tr; Region: Sugar (and other) transporter" /db_xref="CDD:pfam00083" BASE COUNT 620 a 717 c 664 g 787 t ORIGIN 1 gctaacagct gccaatacct cactgagtgc ctcacaccaa catgggctcc aagatgaagg 61 catctttctg atcaggggtt tgtagctcaa acaaaagaat gagcgtgctt ctagaaccac 121 agagcaaggg aacatggtag aggataagct ggcaagttga aaagcgtggg atttcatcca 181 agtttgacac taactgtgca accccaaaca aatctcctaa ccttcagagg ctcggatttc 241 ttgtctatga gatgaagtga gtttcattcg tctgggcaga ctccctcccc tcttccataa 301 aggctgcagg agacctgtag ctgtcacagg accttcccta agagcccgca ggggaagact 361 gccccagtcc ggccatcacc atgctccggc ccattctgga tgctccccag cggttgctga 421 aggaggggag agcgtcccgg cagctggtgc tggtggtggt attcgtcgct ttgctcctgg 481 acaacatgct gtttactgtg gtggtgccaa ttgtgcccac cttcctatat gacatggagt 541 tcaaagaagt caactcttct ctgcacctcg gccatgccgg aagttcccca catgccctcg 601 cctctcctgc cttttccacc atcttctcct tcttcaacaa caacaccgtg gctgttgaag 661 aaagcgtacc tagtggaata gcatggatga atgacactgc cagcaccatc ccacctccag 721 ccactgaagc catctcagct cataaaaaca actgcttgca aggcacaggt ttcttggagg 781 aagagactac ccgggtcggg gttctgtttg cttcaaaggc tgtgatgcaa cttctggtca 841 acccattcgt gggccctctc accaacagga ttggatatca tatccccatg tttgctggct 901 ttgttatcat gtttctctcc acagttatgt ttgctttttc tgggacctat actctactct 961 ttgtggcccg aacccttcaa ggcattggat cttcattttc atctgttgca ggtcttggaa 1021 tgctggccag tgtctacact gatgaccatg agagaggacg agccatggga actgctctgg 1081 ggggcctggc cttggggttg ctggtgggag ctccctttgg aagtgtaatg tacgagtttg 1141 ttgggaagtc tgcacccttc ctcatcctgg ccttcctggc actactggat ggagcactcc 1201 agctttgcat cctacagcct tccaaagtct ctcctgagag tgccaagggg actcccctct 1261 ttatgcttct caaagaccct tacatcctgg tggctgcagg tctagctttc ttgcctgcca 1321 gtgtgtccta cctcattggc accaacctct ttggtgtgtt ggccaacaag atgggtcggt 1381 ggctgtgttc cctaatcggg atgctggtag taggtaccag cttgctctgt gttcctctgg 1441 ctcacaatat ttttggtctc attggcccca atgcagggct tggccttgcc ataggcatgg 1501 tggattcttc tatgatgccc atcatggggc acctggtgga tctacgccac acctcggtgt 1561 atgggagtgt ctacgccatc gctgatgtgg ctttttgcat gggctttgct ataggtccat 1621 ccaccggtgg tgccattgta aaggccatcg gttttccctg gctcatggtc atcactgggg 1681 tcatcaacat cgtctatgct ccactctgct actacctgcg gagccccccg gcaaaggaag 1741 agaagcttgc tattctgagt caggactgcc ccatggagac ccggatgtat gcaacccaga 1801 agcccacgaa ggaatttcct ctgggggagg acagtgatga ggagcctgac catgaggagt 1861 agcagcagaa ggtgctcctt gaattcatga tgcctcagtg accacctctt tccctgggac 1921 cagatcacca tggctgagcc cacggctcag tgggcttcac atacctctgc ctgggaatct 1981 tctttcctcc cctcccatgg acactgtccc tgatactctt ctcacctgtg taacttgtag 2041 ctcttcctct atgccttggt gccgcagtgg cccatctttt atgggaagac agagtgatgc 2101 accttcccgc tgctgtgagg ttgattaaac ttgagctgtg acgggttctg caaggggtga 2161 ctcattgcat agaggtggta gtgagtaatg tgcccctgaa accagtgggg tgactgacaa 2221 gcctctttaa tctgttgcct gattttctct ggcatagtcc caacagatcg gaagagtgtt 2281 accctctttt cctcaacgtg ttctttcccg ggttttccca gccgagttga gaaaatgttc 2341 tcagcattgt cttgctgcca aatgccagct tgaagagttt tgttttgttt tttttccatt 2401 tatttttttt tttaataaag tgagtgattt ttctgtggct aaatctagag ctgctaaaag 2461 ggctttaccc tcagtgaaaa gtgtcttcta ttttcattat ctttcagaaa caggagccca 2521 tttctcttct gctggagtta ttgacattct cctgacctcc cctgtgtgtt cctacctttt 2581 ctgaacctct tagactctta gaaataaaag tagaagaaag acagaaaaaa taactgatta 2641 gacccaagat ttcatgggaa gaagttaaaa gaaactgcct tgaaatccct cctgattgta 2701 gatttcctaa taggaggggt gtaatgtgac attgttcata cttgctaata aatacattat 2761 tgcctaattc aaaaaaaaaa aaaaaaaa //