LOCUS       BC006296                1828 bp    mRNA    linear   HUM 15-JUL-2006
DEFINITION  Homo sapiens activation-induced cytidine deaminase, mRNA (cDNA
            clone MGC:12911 IMAGE:4054915), complete cds.
ACCESSION   BC006296
VERSION     BC006296.2
KEYWORDS    MGC.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 1828)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 1828)
  CONSRTM   NIH MGC Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2001) National Institutes of Health, Mammalian
            Gene Collection (MGC), Bethesda, MD 20892-2590, USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     On Aug 19, 2003 this sequence version replaced BC006296.1.
            Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: Louis Staudt
            cDNA Library Preparation: Rubin Laboratory
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: National Institutes of Health Intramural
            Sequencing Center (NISC),
            Gaithersburg, Maryland;
            Web site: http://www.nisc.nih.gov/
            Contact: nisc_mgc@nhgri.nih.gov
            Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
            Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
            Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
            Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
            Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
            McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
            Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
            Young,A., Zhang,L.-H. and Green,E.D.
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAL Plate: 17 Row: a Column: 1
            This clone was selected for full length sequencing because it
            passed the following selection criteria: matched mRNA gi: 10190699.
FEATURES             Location/Qualifiers
     source          1..1828
                     /db_xref="H-InvDB:HIT000032736"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="MGC:12911 IMAGE:4054915"
                     /tissue_type="Primary B-Cells from Tonsils"
                     /clone_lib="NIH_MGC_48"
                     /lab_host="DH10B-R"
                     /note="Vector: pOTB7"
     gene            1..1828
                     /gene="AICDA"
                     /gene_synonym="AID"
                     /gene_synonym="ARP2"
                     /gene_synonym="CDA2"
                     /gene_synonym="HIGM2"
                     /db_xref="GeneID:57379"
                     /db_xref="HGNC:HGNC:13203"
                     /db_xref="MIM:605257"
     CDS             77..673
                     /gene="AICDA"
                     /gene_synonym="AID"
                     /gene_synonym="ARP2"
                     /gene_synonym="CDA2"
                     /gene_synonym="HIGM2"
                     /codon_start=1
                     /product="activation-induced cytidine deaminase"
                     /protein_id="AAH06296.1"
                     /db_xref="GeneID:57379"
                     /db_xref="HGNC:HGNC:13203"
                     /db_xref="MIM:605257"
                     /translation="MDSLLMNRRKFLYQFKNVRWAKGRRETYLCYVVKRRDSATSFSL
                     DFGYLRNKNGCHVELLFLRYISDWDLDPGRCYRVTWFTSWSPCYDCARHVADFLRGNP
                     NLSLRIFTARLYFCEDRKAEPEGLRRLHRAGVQIAIMTFKDYFYCWNTFVENHERTFK
                     AWEGLHENSVRLSRQLRRILLPLYEVDDLRDAFRTLGL"
BASE COUNT          528 a          385 c          416 g          499 t
ORIGIN      
        1 gaaccatcat taattgaagt gagatttttc tggcctgaga cttgcaggga ggcaagaaga
       61 cactctggac accactatgg acagcctctt gatgaaccgg aggaagtttc tttaccaatt
      121 caaaaatgtc cgctgggcta agggtcggcg tgagacctac ctgtgctacg tagtgaagag
      181 gcgtgacagt gctacatcct tttcactgga ctttggttat cttcgcaata agaacggctg
      241 ccacgtggaa ttgctcttcc tccgctacat ctcggactgg gacctagacc ctggccgctg
      301 ctaccgcgtc acctggttca cctcctggag cccctgctac gactgtgccc gacatgtggc
      361 cgactttctg cgagggaacc ccaacctcag tctgaggatc ttcaccgcgc gcctctactt
      421 ctgtgaggac cgcaaggctg agcccgaggg gctgcggcgg ctgcaccgcg ccggggtgca
      481 aatagccatc atgaccttca aagattattt ttactgctgg aatacttttg tagaaaacca
      541 tgaaagaact ttcaaagcct gggaagggct gcatgaaaat tcagttcgtc tctccagaca
      601 gcttcggcgc atccttttgc ccctgtatga ggttgatgac ttacgagacg catttcgtac
      661 tttgggactt tgatagcaac ttccaggaat gtcacacacg atgaaatatc tctgctgaag
      721 acagtggata aaaaacagtc cttcaagtct tctctgtttt tattcttcaa ctctcacttt
      781 cttagagttt acagaaaaaa tatttatata cgactcttta aaaagatcta tgtcttgaaa
      841 atagagaagg aacacaggtc tggccaggga cgtgctgcaa ttggtgcagt tttgaatgca
      901 acattgtccc ctactgggaa taacagaact gcaggacctg ggagcatcct aaagtgtcaa
      961 cgtttttcta tgacttttag gtaggatgag agcagaaggt agatcctaaa aagcatggtg
     1021 agaggatcaa atgtttttat atcaacatcc tttattattt gattcatttg agttaacagt
     1081 ggtgttagtg atagattttt ctattctttt cccttgacgt ttactttcaa gtaacacaaa
     1141 ctcttccatc aggccatgat ctataggacc tcctaatgag agtatctggg tgattgtgac
     1201 cccaaaccat ctctccaaag cattaatatc caatcatgcg ctgtatgttt taatcagcag
     1261 aagcatgttt ttatgtttgt acaaaagaag attgttatgg gtggggatgg aggtatagac
     1321 catgcatggt caccttcaag ctactttaat aaaggatctt aaaatgggca ggaggactgt
     1381 gaacaagaca ccctaataat gggttgatgt ctgaagtagc aaatcttctg gaaacgcaaa
     1441 ctcttttaag gaagtcccta atttagaaac acccacaaac ttcacatatc ataattagca
     1501 aacaattgga aggaagttgc ttgaatgttg gggagaggaa aatctattgg ctctcgtggg
     1561 tctcttcatc tcagaaatgc caatcaggtc aaggtttgct acattttgta tgtgtgtgat
     1621 gcttctccca aaggtatatt aactatataa gagagttgtg acaaaacaga atgataaagc
     1681 tgcgaaccgt ggcacacgct catagttcta gctgcttggg aggttgagga gggaggatgg
     1741 cttgaacaca ggtgttcaag gccagcctgg gcaacataac aagatcctgt ctctcaaaaa
     1801 aaaaaaaaaa aaaaaaaaaa aaaaaaaa
//