LOCUS BC006296 1828 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens activation-induced cytidine deaminase, mRNA (cDNA clone MGC:12911 IMAGE:4054915), complete cds. ACCESSION BC006296 VERSION BC006296.2 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1828) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1828) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (09-APR-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Aug 19, 2003 this sequence version replaced BC006296.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Louis Staudt cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 17 Row: a Column: 1 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 10190699. FEATURES Location/Qualifiers source 1..1828 /db_xref="H-InvDB:HIT000032736" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:12911 IMAGE:4054915" /tissue_type="Primary B-Cells from Tonsils" /clone_lib="NIH_MGC_48" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..1828 /gene="AICDA" /gene_synonym="AID" /gene_synonym="ARP2" /gene_synonym="CDA2" /gene_synonym="HIGM2" /db_xref="GeneID:57379" /db_xref="HGNC:HGNC:13203" /db_xref="MIM:605257" CDS 77..673 /gene="AICDA" /gene_synonym="AID" /gene_synonym="ARP2" /gene_synonym="CDA2" /gene_synonym="HIGM2" /codon_start=1 /product="activation-induced cytidine deaminase" /protein_id="AAH06296.1" /db_xref="GeneID:57379" /db_xref="HGNC:HGNC:13203" /db_xref="MIM:605257" /translation="MDSLLMNRRKFLYQFKNVRWAKGRRETYLCYVVKRRDSATSFSL DFGYLRNKNGCHVELLFLRYISDWDLDPGRCYRVTWFTSWSPCYDCARHVADFLRGNP NLSLRIFTARLYFCEDRKAEPEGLRRLHRAGVQIAIMTFKDYFYCWNTFVENHERTFK AWEGLHENSVRLSRQLRRILLPLYEVDDLRDAFRTLGL" BASE COUNT 528 a 385 c 416 g 499 t ORIGIN 1 gaaccatcat taattgaagt gagatttttc tggcctgaga cttgcaggga ggcaagaaga 61 cactctggac accactatgg acagcctctt gatgaaccgg aggaagtttc tttaccaatt 121 caaaaatgtc cgctgggcta agggtcggcg tgagacctac ctgtgctacg tagtgaagag 181 gcgtgacagt gctacatcct tttcactgga ctttggttat cttcgcaata agaacggctg 241 ccacgtggaa ttgctcttcc tccgctacat ctcggactgg gacctagacc ctggccgctg 301 ctaccgcgtc acctggttca cctcctggag cccctgctac gactgtgccc gacatgtggc 361 cgactttctg cgagggaacc ccaacctcag tctgaggatc ttcaccgcgc gcctctactt 421 ctgtgaggac cgcaaggctg agcccgaggg gctgcggcgg ctgcaccgcg ccggggtgca 481 aatagccatc atgaccttca aagattattt ttactgctgg aatacttttg tagaaaacca 541 tgaaagaact ttcaaagcct gggaagggct gcatgaaaat tcagttcgtc tctccagaca 601 gcttcggcgc atccttttgc ccctgtatga ggttgatgac ttacgagacg catttcgtac 661 tttgggactt tgatagcaac ttccaggaat gtcacacacg atgaaatatc tctgctgaag 721 acagtggata aaaaacagtc cttcaagtct tctctgtttt tattcttcaa ctctcacttt 781 cttagagttt acagaaaaaa tatttatata cgactcttta aaaagatcta tgtcttgaaa 841 atagagaagg aacacaggtc tggccaggga cgtgctgcaa ttggtgcagt tttgaatgca 901 acattgtccc ctactgggaa taacagaact gcaggacctg ggagcatcct aaagtgtcaa 961 cgtttttcta tgacttttag gtaggatgag agcagaaggt agatcctaaa aagcatggtg 1021 agaggatcaa atgtttttat atcaacatcc tttattattt gattcatttg agttaacagt 1081 ggtgttagtg atagattttt ctattctttt cccttgacgt ttactttcaa gtaacacaaa 1141 ctcttccatc aggccatgat ctataggacc tcctaatgag agtatctggg tgattgtgac 1201 cccaaaccat ctctccaaag cattaatatc caatcatgcg ctgtatgttt taatcagcag 1261 aagcatgttt ttatgtttgt acaaaagaag attgttatgg gtggggatgg aggtatagac 1321 catgcatggt caccttcaag ctactttaat aaaggatctt aaaatgggca ggaggactgt 1381 gaacaagaca ccctaataat gggttgatgt ctgaagtagc aaatcttctg gaaacgcaaa 1441 ctcttttaag gaagtcccta atttagaaac acccacaaac ttcacatatc ataattagca 1501 aacaattgga aggaagttgc ttgaatgttg gggagaggaa aatctattgg ctctcgtggg 1561 tctcttcatc tcagaaatgc caatcaggtc aaggtttgct acattttgta tgtgtgtgat 1621 gcttctccca aaggtatatt aactatataa gagagttgtg acaaaacaga atgataaagc 1681 tgcgaaccgt ggcacacgct catagttcta gctgcttggg aggttgagga gggaggatgg 1741 cttgaacaca ggtgttcaag gccagcctgg gcaacataac aagatcctgt ctctcaaaaa 1801 aaaaaaaaaa aaaaaaaaaa aaaaaaaa //