LOCUS BC006182 2128 bp mRNA linear HUM 03-OCT-2003
DEFINITION Homo sapiens calmodulin 3 (phosphorylase kinase, delta), mRNA (cDNA
clone MGC:715 IMAGE:3528814), complete cds.
ACCESSION BC006182
VERSION BC006182.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2128)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2128)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (02-APR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Steven Jones, Jennifer Asano, Ian Bosdet, Yaron Butterfield,
Susanna Chan, Readman Chiu, Chris Fjell, Erin Garland, Ran Guin,
Letticia Hsiao, Martin Krzywinski, Reta Kutsche, Oliver Lee, Soo
Sen Lee, Victor Ling, Carrie Mathewson, Candice McLeavy, Steven
Ness, Pawan Pandoh, Anna-Liisa Prabhu, Parvaneh Saeedi, Jacqueline
Schein, Duane Smailus, Michael Smith, Lorraine Spence, Jeff Stott,
Michael Thorne, Miranada Tsai, Natasja van den Bosch, Jill Vardy,
George Yang, Scott Zuyderduyn, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 8 Row: a Column: 5
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 22547137.
FEATURES Location/Qualifiers
source 1..2128
/db_xref="H-InvDB:HIT000032654"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:715 IMAGE:3528814"
/tissue_type="Muscle, rhabdomyosarcoma"
/clone_lib="NIH_MGC_17"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2128
/gene="CALM3"
/gene_synonym="PHKD"
/gene_synonym="PHKD3"
/db_xref="GeneID:808"
/db_xref="MIM:114183"
CDS 286..729
/gene="CALM3"
/gene_synonym="PHKD"
/gene_synonym="PHKD3"
/codon_start=1
/product="CALM3 protein"
/protein_id="AAH06182.1"
/db_xref="GeneID:808"
/db_xref="MIM:114183"
/translation="MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNP
TEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYIS
AAELRHVMTNLGEKLTDESLSMPLISSFCPRLFHPCLPRPDAFIS"
misc_feature 295..651
/gene="CALM3"
/gene_synonym="PHKD"
/gene_synonym="PHKD3"
/note="FRQ1; Region: COG5126, FRQ1, Ca2+-binding protein
(EF-Hand superfamily) [Signal transduction mechanisms /
Cytoskeleton / Cell division and chromosome partitioning /
General function prediction only]"
/db_xref="CDD:COG5126"
BASE COUNT 417 a 603 c 635 g 473 t
ORIGIN
1 ggggacgaga gattcgcggg cccgtaggtg tggagcgggg cgcggaggga tccgtgggag
61 ccgcagtgcg gcggcgcgcg ggccgggtgg ggcggggccg agcgaggcgg ggcgcgcgcg
121 gcggccgttg agggaccgtt ggggcgggag gcggcggcgg cggcggcgcg cgctgcgggc
181 agtgagtgtg gaggcgcgga cgcgcggcgg agctggaact gctgcagctg ctgccgccgc
241 cggaggaacc ttgatccccg tgctccggac accccgggcc tcgccatggc tgaccagctg
301 actgaggagc agattgcaga gttcaaggag gccttctccc tctttgacaa ggatggagat
361 ggcactatca ccaccaagga gttggggaca gtgatgagat ccctgggaca gaaccccact
421 gaagcagagc tgcaggatat gatcaatgag gtggatgcag atgggaacgg gaccattgac
481 ttcccggagt tcctgaccat gatggccaga aagatgaagg acacagacag tgaggaggag
541 atccgagagg cgttccgtgt ctttgacaag gatgggaatg gctacatcag cgccgcagag
601 ctgcgtcacg taatgacgaa cctgggggag aagctgaccg atgagtctct ctccatgccc
661 ctcatctctt ccttttgccc tcgcctcttc catccatgtc ttccaaggcc tgatgcattc
721 ataagttgaa gccctcccca gatccccttg gggagcctct gccctcctcc agcccggatg
781 gctctcctcc attttggttt gtttcctctt gtttgtcatc ttattttggg tgctggggtg
841 gctgccagcc ctgtcccggg acctgctggg agggacaaga ggccctcccc caggcagaag
901 agcatgccct ttgccgttgc atgcaaccag ccctgtgatt ccacgtgcag atcccagcag
961 cctgttgggg caggggtgcc aagagaggca ttccagaagg actgaggggg cgttgaggaa
1021 ttgtggcgtt gactggatgt ggcccaggag ggggtcgagg gggccaactc acagaagggg
1081 actgacagtg ggcaacactc acatcccact ggctgctgtt ctgaaaccat ctgattggct
1141 ttctgaggtt tggctgggtg gggactgctc atttggccac tctgcagatt ggacttgccc
1201 gcgttcctga agcgctctcg agctgttctg taaatacctg gtgctaacat cccatgccgc
1261 tccctcctca cgatgcaccc accgccctga gggcccgtcc taggaatgga tgtggggatg
1321 gtcgctttgt aatgtgctgg ttctcttttt tttttttctt tcccctctat ggcccttaag
1381 actttcattt tgttcagaac catgctgggc tagctaaagg gtggggagag ggaagatggg
1441 ccccaccacg ctctcaagag aacgcacctg caataaaaca gtcttgtcgg ccagctgccc
1501 aggggacggc agctacagca gcctctgcgt cctggtccgc cagcacctcc cgcttctccg
1561 tggtgacttg gcgccgcttc ctcacatctg tgctccgtgc cctcttccct gcctcttccc
1621 tcgcccacct gcctgccccc atactccccc agcggagagc atgatccgtg cccttgcttc
1681 tgactttcgc ctctgggaca agtaagtcaa tgtgggcagt tcagtcgtct gggttttttc
1741 cccttttctg ttcatttcat cctggctccc cccaccacct ccccacccca ccccccaccc
1801 cctgcttccc ctcactgccc aggtcgatca agtggctttt cctgggacct gcccagcttt
1861 gagaatctct tctcatccac cctctggcac ccagcctctg agggaaggag ggatggggca
1921 tagtgggaga cccagccaag agctgagggt aagggcaggt aggcgtgagg ctgtggacat
1981 tttcggaatg ttttggtttt gtttttttta aaccgggcaa tattgtgttt agttcaagct
2041 gtgaagaaaa atatatatca atgttttcca ataaaataca gtgactacct gaaaaaaaaa
2101 aaaaaaaaaa aaaaaaaaaa aaaaaaaa
//