LOCUS BC006174 1660 bp mRNA linear HUM 24-JUN-2004 DEFINITION Homo sapiens F-box protein 42, mRNA (cDNA clone IMAGE:4053618), partial cds. ACCESSION BC006174 VERSION BC006174.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1660) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1660) AUTHORS Strausberg,R. TITLE Direct Submission JOURNAL Submitted (02-APR-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Cancer Genomics Office, National Cancer Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Steve Jones, Sarah Barber, Mabel Brown-John, Yaron Butterfield, Andy Chan, Steve S. Chand, William Chow, Alison Cloutier, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Amara Masson, Mike R. Mayo, Josh Moran, Ryan Morin, Teika Olson, Diana Palmquist, Anca Petrescu, Anna Liisa Prahbu, Parvaneh Saeedi, JR Santos, Angelique Schnerch, Ursula Skalska, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 18 Row: p Column: 20 This clone was selected for full length sequencing because it passed the following selection criteria: Hexamer frequency ORF analysis. FEATURES Location/Qualifiers source 1..1660 /db_xref="H-InvDB:HIT000086611" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:4053618" /tissue_type="Uterus, leiomyosarcoma" /clone_lib="NIH_MGC_46" /lab_host="DH10B-R" /note="Vector: pOTB7" gene <1..1660 /gene="FBXO42" /gene_synonym="KIAA1332" /db_xref="GeneID:54455" CDS <1..1542 /gene="FBXO42" /gene_synonym="KIAA1332" /codon_start=1 /product="FBXO42 protein" /protein_id="AAH06174.1" /db_xref="GeneID:54455" /translation="RFFDEIHTYSPSKNWWNCIVTTHGPPPMAGHSSCVIDDKMIVFG GSLGSRQMSNDVWVLDLEQWAWSKPNISGPSPHPRGGQSQIVIDDATILILGGCGGPN ALFKDAWLLHMHSGPWAWQPLKVENEEHGAPELWCHPACRVGQCVVVFSQAPSGRAPL SPSLNSRPSPISATPPALVPETREYRSQSPVRSMDEAPCVNGRWGTLRPRAQRQTPSG SREGSLSPARGDGSPILNGGSLSPGTAAVGGSSLDSPVQAISPSTPSAAEGYDLKIGL SLAPRRGSLPDQKDLRLGSIDLNWDLKPASSSNPMDGMDNRTVGGSMRHPPEQTNGVH TPPHVASALAGAVSPGALRRSLEAIKAMSSKGPSASAALSPPLGSSPGSPGSQSLSSG ETVPIPRPGPAQGDGHSLPPIARRLGHHPPQSLNVGKPLYQSMNCKPMQMYVLDIKDT KEKGRVKWKVFNSSSVVGPPETSLHTVVQGRGELIIFGGLMDKKQNVKYYPKTNALYF VRAKR" BASE COUNT 415 a 441 c 417 g 387 t ORIGIN 1 agattctttg atgaaataca cacttactca ccctctaaaa attggtggaa ctgcattgtg 61 acaacccatg ggccacctcc catggctggc cactcctcct gtgtgataga tgataaaatg 121 attgtctttg gtggctcttt aggatcccgg caaatgagca atgatgtctg ggtccttgac 181 cttgagcagt gggcgtggtc caagccgaac atctctggcc ccagtcctca tcctcgaggt 241 ggccaatctc agattgtcat agatgatgca actatcttaa tcctcggagg gtgtggcggt 301 cccaatgctc tattcaagga tgcttggttg ttgcacatgc attctggtcc ttgggcctgg 361 cagccactca aggtagaaaa tgaagagcat ggggccccag aactgtggtg ccatccagct 421 tgccgggtgg gacagtgtgt ggtggtcttc agccaggctc ctagtgggag agccccactc 481 agccccagtt tgaactctcg cccatcacct atcagtgcca ctcctccagc tctcgttcct 541 gaaacccgag agtaccgctc tcagtctcca gtaagaagca tggatgaagc tccttgtgtt 601 aacggccgct ggggaacact gagacccagg gctcaaaggc agactccttc aggttcccgg 661 gaagggagcc tttccccagc cagaggagac ggctctccta tcctcaatgg tgggagtttg 721 tctccaggaa cggcagctgt gggtggctct tctttggaca gtcctgtaca ggccatatct 781 ccaagtactc catctgctgc tgaaggatac gacctgaaaa taggactttc tttggccccc 841 cgacgaggat cactaccaga tcagaaagat ctgagattag gatccataga tctgaattgg 901 gatctgaaac ccgcttccag tagtaatccc atggatggca tggacaatag gacagttggg 961 ggaagtatga gacaccctcc tgaacagaca aatggtgtgc ataccccacc tcacgtggcc 1021 agtgcccttg caggggccgt ctccccaggt gccctgcgtc ggagtctgga agccatcaaa 1081 gcgatgtcct ccaaaggccc ctcggcctct gcagcactaa gtcctcctct tgggtcttct 1141 ccaggctctc ctgggagcca gagtttgagc agtggagaaa cagtgcccat ccctcgccca 1201 gggcctgccc aaggagatgg acattcctta cctcccattg ctcgccgcct gggccaccac 1261 cctccacagt ccctaaatgt tggcaaaccc ctataccaga gtatgaactg caagcccatg 1321 cagatgtacg tgctggacat taaagacacc aaggagaagg ggcgggtcaa atggaaagta 1381 tttaatagca gttctgtggt tggacctcct gaaaccagcc tgcataccgt ggtacaaggc 1441 aggggtgaac tcatcatatt tggaggactc atggacaaga aacagaatgt gaagtactat 1501 ccaaaaacaa acgccttgta ctttgtacga gcaaagagat aatgtgttct aaaccccttt 1561 ccttttctgt ggcttttaat ttggaatttt ccagtgtgta agcatttgga ctgagaattg 1621 ggaaaacaaa attactccca gaaaaaaaaa aaaaaaaaaa //