LOCUS BC006173 1704 bp mRNA linear HUM 04-DEC-2007
DEFINITION Homo sapiens inverted formin, FH2 and WH2 domain containing, mRNA
(cDNA clone IMAGE:4053416), complete cds.
ACCESSION BC006173
VERSION BC006173.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1704)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1704)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-APR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 18 Row: p Column: 22
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 14249315
This clone has the following problem: The cds is short compared to
the longest cds in the locus.
FEATURES Location/Qualifiers
source 1..1704
/db_xref="H-InvDB:HIT000032648"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4053416"
/tissue_type="Uterus, leiomyosarcoma"
/clone_lib="NIH_MGC_46"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1704
/gene="INF2"
/gene_synonym="pp9484"
/db_xref="GeneID:64423"
/db_xref="HGNC:HGNC:23791"
/db_xref="MIM:610982"
CDS 129..833
/gene="INF2"
/gene_synonym="pp9484"
/codon_start=1
/product="inverted formin, FH2 and WH2 domain containing"
/protein_id="AAH06173.1"
/db_xref="GeneID:64423"
/db_xref="HGNC:HGNC:23791"
/db_xref="MIM:610982"
/translation="MSVKEGAQRKWAALKEKLGPQDSDPTEANLESADPELCIRLLQM
PSVVNYSGLRKRLEGSDGGWMVQFLEQSGLDLLLEALARLSGRGVARISDALLQLTCV
SCVRAVMNSRQGIEYILSNQGYVRQLSQALDTSNVMVKKQVFELLAALCIYSPEGHVL
TLDALDHYKTVCSQQYRFSIVMNELSGSDNVPYVVTLLSVINAVILGPEDLRARTQLR
NEFIGLQLLDVLARLR"
BASE COUNT 376 a 539 c 503 g 286 t
ORIGIN
1 aggagccacc gtccgagcct tgcggagcgc ggcagtgggc gccggctgcc cgcagcccct
61 gacccggccc cggacggagc gccggccgca ccaccgccct ctggccgttg cctcaccggc
121 tcggcaagat gtcggtgaag gagggcgcac agcgcaagtg ggcagcgctg aaggagaagc
181 tggggccaca ggattcggac cccacggagg ccaacctgga gagcgcggac cctgagctgt
241 gcatccggct gctccagatg ccctctgtgg tcaactactc cggcctgcgc aagcgcctgg
301 agggcagcga cggcggctgg atggtgcagt tcctggagca gagcggcctg gacctgctgc
361 tggaggcgct ggcgcggctg tcgggccgcg gcgttgcacg tatctccgac gccctgctgc
421 agctcacctg cgtcagctgc gtgcgcgccg tcatgaactc gcggcagggc atcgagtaca
481 tcctcagcaa ccagggctac gtgcgccagc tctcccaggc cctggacaca tccaacgtga
541 tggtgaagaa gcaggtgttt gagctactgg ctgccctgtg catctactct cccgagggcc
601 acgtgctgac cctggacgcc ctggaccact acaagacggt gtgcagccag cagtaccgct
661 tcagcattgt catgaacgag ctctccggca gcgacaacgt gccctacgtg gtcaccctgc
721 ttagcgtgat caacgccgtc atcttgggcc ccgaggacct gcgcgcgcgc acccagctgc
781 ggaacgagtt tatcgggctg cagctgctgg acgtcctggc tcgcctgcgg tgagtcccca
841 ctgtagcggt cctgccggct ccccctcctg ctcccaaggc caggcccacc tgccctttgg
901 ctcccagcca cctcacctaa gcagcacctc cagatggcag ggaggtggct ccctcggagt
961 aaccccaggg gtccagccag aagccaggtc tcaggctaga atccagctca ctgtccctgg
1021 cagctgccca cagaaactag ggttgcagca gccatagaaa ggacagaatg agctcatatc
1081 ctttgcacac cgtggatgga gctggaggcc gtgatcctaa gtgaaccaac ccagaaacag
1141 aaaatgaaat gccaataaga gggaactaca gggtggttca cgtggacgca agatggagac
1201 agggacacgg gctccagggc gagagttgaa aaactaccta cagggtacag tgttcgtcgc
1261 tacttggtgt caggcccact agaacaaggg tccccaaccg ccaggctgcg gaccggtacc
1321 tggcctattg gaaccgggcc acgcagcagg aagtgagcgg tgggcgggca ttcctgcctg
1381 agctgcacct catgtcagat cagcactgca ttagattctc cagcgcacgc acgcgcgcaa
1441 gggatccagg ctgcgcgctc ctcatgacaa tctaatgcct gatgatcggg ggtggaacag
1501 ttttatccct aaaccattcc cgtcacccca gtctatggaa aaattgtctt ccacaaaacc
1561 agtccctggt gccaaaaagg ctggggacca ctgccctaga aggcaaatcg cctacgttac
1621 acagtgtacc atgtggcaaa cacgcacatg tacccccgag tctaaaataa aaatttttta
1681 aaaaagaaaa aaaaaaaaaa aaaa
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