LOCUS BC006114 2046 bp mRNA linear HUM 06-JUN-2006 DEFINITION Homo sapiens cholinergic receptor, nicotinic, alpha 3, mRNA (cDNA clone MGC:12991 IMAGE:3503197), complete cds. ACCESSION BC006114 VERSION BC006114.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2046) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2046) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (02-APR-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 18 Row: d Column: 11 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 19923121. FEATURES Location/Qualifiers source 1..2046 /db_xref="H-InvDB:HIT000032614" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:12991 IMAGE:3503197" /tissue_type="Brain, neuroblastoma" /clone_lib="NIH_MGC_19" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..2046 /gene="CHRNA3" /db_xref="GeneID:1136" /db_xref="HGNC:HGNC:1957" /db_xref="MIM:118503" CDS 502..1971 /gene="CHRNA3" /codon_start=1 /product="CHRNA3 protein" /protein_id="AAH06114.1" /db_xref="GeneID:1136" /db_xref="HGNC:HGNC:1957" /db_xref="MIM:118503" /translation="MGSGPLSLPLALSPPRLLLLLLLSLLPVARASEAEHRLFERLFE DYNEIIRPVANVSDPVIIHFEVSMSQLVKVDEVNQIMETNLWLKQIWNDYKLKWNPSD YGGAEFMRVPAQKIWKPDIVLYNNAVGDFQVDDKTKALLKYTGEVTWIPPAIFKSSCK IDVTYFPFDYQNCTMKFGSWSYDKAKIDLVLIGSSMNLKDYWESGEWAIIKAPGYKHD IKYNCCEEIYPDITYSLYIRRLPLFYTINLIIPCLLISFLTVLVFYLPSDCGEKVTLC ISVLLSLTVFLLVITETIPSTSLVIPLIGEYLLFTMIFVTLSIVITVFVLNVHYRTPT THTMPSWVKTVFLNLLPRVMFMTRPTSNEGNAQKPRPLYGAELSNLNCFSRAESKGCK EGYPCQDGMCGYCHHRRIKISNFSANLTRSSSSESVDAVLSLSALSPEIKEAIQSVKY IAENMKAQNEAKEEQKAQEIQQLKRKEKSTETSDQEPGL" BASE COUNT 469 a 639 c 516 g 422 t ORIGIN 1 gtccttccca gggtgtgtta gcgtctctcc tacggcgccc gcctagcccg gtggtcccaa 61 ccccctgcgg gagctgcaca cgccccggaa acctgggaca gaaactgagt ccctctcctt 121 cctggtggtg gtgacagcac ctgctcagat ctggtcggac gccgccggcc ggagcaccca 181 gcccggcgga gaaggagctc gcccggcgct ggggactggg acctggagcc ccttccccta 241 ccgcacgtac gccccgcccc gcgcacgccc gcccgcccgc ccgcgcctgg cgcagcttca 301 ctccggatgg ttcctgtcct cccgcgggtc cgagggcgct ggaaacccag cggcggcgaa 361 gcggagagga gccccgcgcg tctccgcccg cacggctcca ggtctggggt ctgcgctgga 421 gccgcgcggg gagaggccgt ctctgcgacc gccgcgcccg ctcccgaccg tccgggtccg 481 cggccagccc ggccaccagc catgggctct ggcccgctct cgctgcccct ggcgctgtcg 541 ccgccgcggc tgctgctgct gctgctgctg tctctgctgc cagtggccag ggcctcagag 601 gctgagcacc gtctatttga gcggctgttt gaagattaca atgagatcat ccggcctgta 661 gccaacgtgt ctgacccagt catcatccat ttcgaggtgt ccatgtctca gctggtgaag 721 gtggatgaag taaaccagat catggagacc aacctgtggc tcaagcaaat ctggaatgac 781 tacaagctga aatggaaccc ctctgactat ggtggggcag agttcatgcg tgtccctgca 841 cagaagatct ggaagccaga cattgtgctg tataacaatg ctgttgggga tttccaggtg 901 gacgacaaga ccaaagcctt actcaagtac actggggagg tgacttggat acctccggcc 961 atctttaaga gctcctgtaa aatcgacgtg acctacttcc cgtttgatta ccaaaactgt 1021 accatgaagt tcggttcctg gtcctacgat aaggcgaaaa tcgatctggt cctgatcggc 1081 tcttccatga acctcaagga ctattgggag agcggcgagt gggccatcat caaagcccca 1141 ggctacaaac acgacatcaa gtacaactgc tgcgaggaga tctaccccga catcacatac 1201 tcgctgtaca tccggcgcct gcccttgttc tacaccatca acctcatcat cccctgcctg 1261 ctcatctcct tcctcactgt gctcgtcttc tacctgccct ccgactgcgg tgagaaggtg 1321 accctgtgca tttctgtcct cctctccctg acggtgtttc tcctggtgat cactgagacc 1381 atcccttcca cctcgctggt catccccctg attggagagt acctcctgtt caccatgatt 1441 tttgtaacct tgtccatcgt catcaccgtc ttcgtgctca acgtgcacta cagaaccccg 1501 acgacacaca caatgccctc atgggtgaag actgtattct tgaacctgct ccccagggtc 1561 atgttcatga ccaggccaac aagcaacgag ggcaacgctc agaagccgag gcccctctac 1621 ggtgccgagc tctcaaatct gaattgcttc agccgcgcag agtccaaagg ctgcaaggag 1681 ggctacccct gccaggacgg gatgtgtggt tactgccacc accgcaggat aaaaatctcc 1741 aatttcagtg ctaacctcac gagaagctct agttctgaat ctgttgatgc tgtgctgtcc 1801 ctctctgctt tgtcaccaga aatcaaagaa gccatccaaa gtgtcaagta tattgctgaa 1861 aatatgaaag cacaaaatga agccaaagag gaacaaaaag cccaagagat ccaacaattg 1921 aaacgaaaag aaaagtccac agaaacatcc gatcaagaac ctgggctatg aatttccaat 1981 cttcaacaac ctgttaggaa aaaaataaaa atgcattaaa taattgtaaa aaaaaaaaaa 2041 aaaaaa //