LOCUS BC006110 2221 bp mRNA linear HUM 03-NOV-2008
DEFINITION Homo sapiens hypothetical protein LOC84792, mRNA (cDNA clone
MGC:12966 IMAGE:3139887), complete cds.
ACCESSION BC006110
VERSION BC006110.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2221)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2221)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-APR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 18 Row: c Column: 4
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 14249303.
FEATURES Location/Qualifiers
source 1..2221
/db_xref="H-InvDB:HIT000032611"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:12966 IMAGE:3139887"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_21"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2221
/gene="MGC12966"
/db_xref="GeneID:84792"
CDS 469..1248
/gene="MGC12966"
/codon_start=1
/product="hypothetical protein LOC84792"
/protein_id="AAH06110.2"
/db_xref="GeneID:84792"
/translation="MRDRRGPLGTCLAQVQQAGGGDSDKLSCSLKKRMPEGPWPADAP
SWMNKPVVDGNSQSEALSLEMRKDPSGAGLWLHSGGPVLPYVRESVRRNPASAATPST
AVGLFPAPTECFARVSCSGVEALGRRDWLGGGPRATDGHRGQCPKGEPRVSRLPRHQK
VPEMGSFQDDPPSAFPKGLGSELEPACLHSILSATLHVYPEVLLSEETKRIFLDRLKP
MFSKQTIEFKKMLKSTSDGLQITLGLLALQPFELANTLCHS"
BASE COUNT 582 a 533 c 550 g 556 t
ORIGIN
1 cggccaggct ggtacaggcg gctgctcgcg gaggcacttc tccgagcgtg acgtgcggac
61 tccgctccac tgcggcccgc ccgcccgccg gtctagccgc cgcctccttc gctccctgag
121 cacgccaggc gagggtcagc tgccggggcg acgcggcgcg gagagggcgg gcgggggggc
181 tgtgggagcg ccggtctcta tatggcggcg gctctgtcgg gcctggctgt ccggctctcg
241 cgctcggccg ccgcccgctc ctatggggtc ttctgcaagg ggctgactcg cacgctgctc
301 atcttcttcg acctggcctg gcggctgcgt atcaacttcc cctacctcta catcgtggct
361 tccatgatgc tcaacgtccg cctgcaggtt catattgaga tccattgaag gccctcccag
421 actgacgaag gcgtgacctc aggcccaccg catccaagaa cacgaagcat gagggacaga
481 agagggcccc tcggcacctg cctggcacaa gtgcagcagg ccggaggagg tgactcggac
541 aaactatcat gcagccttaa gaaaagaatg ccggagggcc cttggcctgc agatgcaccc
601 tcctggatga ataagcctgt ggttgatgga aattcacaaa gtgaggcatt atcactggaa
661 atgagaaagg atccgagcgg ggctggcctc tggcttcaca gtggcggccc agtgcttcca
721 tatgtgagag aatcagtaag aagaaatcca gcctcagcag ccactccgag cacagccgtg
781 ggtttgttcc ctgctccaac agagtgtttt gctcgggtgt cctgcagtgg tgttgaagct
841 ctggggcggc gagactggct gggaggaggg cccagggcca ctgacggcca cagaggacag
901 tgccccaaag gagagcctcg ggtgtcacga ctgccacgcc atcaaaaagt gccggaaatg
961 ggaagttttc aggatgaccc accaagtgct tttcccaagg gtctgggctc tgagttggaa
1021 cccgcttgcc tgcactccat cctgtctgca acgctgcacg tgtatcccga agtgctcctg
1081 agtgaggaga caaaacgcat tttccttgac cgtttaaagc ccatgttttc aaagcaaaca
1141 atagaattca agaaaatgct taaaagcacc tcagatggtc tgcagataac actggggtta
1201 ctggctctgc aaccttttga attagcaaat acattatgcc atagttaagg tacaagcaga
1261 acaataccaa tagattaatt ttaagagttg tcttagaatg atttctttcg cattaagtct
1321 ggatgcaaac tgtgcagccc ttaggttcct gctgtagttt tgtacgacct ggcagactta
1381 aagtaaattg agtttaaatt caaagccagt tgatgcggaa ggaacttttt tggcatgtgt
1441 taaattgtgc tttaaaagac atataaagaa ttgggaaaca tttcaggaga cgatcatagc
1501 ctgtataaat accagattag aacatacgga tttaccatga agttctgtct tcaacatcca
1561 ttctaaaggg ctactgtccc aaatcctgtg tgtccttttg acttgtctga tcacccaatg
1621 gaagtggata cttgtaaagt ctacaccact gtacttggcg ttaaatcttg ctgaattcgt
1681 ggtaagctgt taccatgtct acattttgta gaatgatttt ggtctgcagc aaaattcgat
1741 ttcacttctc ataccccttt ccttccactt gaaatgcaat ttagacagag gccctgtggt
1801 gaaagttgca atattaagtt tacctttaga agatcccttc tcaaactcag aaccctagca
1861 gtgttacctt aaacaaaaat gagctcgaga aaaaagtagc tcagttacag agaagcaaat
1921 cgagttattt cccacataaa aagtttccca gattctaaga attgcagtat cctgtaccct
1981 aaaatttttc aaggtgactc ctgttgtcgt ctgttgataa ctttaataaa ggtcatttaa
2041 ggacataagt ttttaaagac tcccaaagtg aaacttaaac attttcggga ttatcgattg
2101 catatatcag tttatgctgt gtgctgaatt actatgccat gtgctatttt agtgtttggg
2161 gaaaatgaaa aataaaattt gttctttagc ttaaaaaaaa aaaaaaaaaa aaaaaaaaaa
2221 a
//