LOCUS BC006104 2495 bp mRNA linear HUM 11-AUG-2006 DEFINITION Homo sapiens RIO kinase 1 (yeast), mRNA (cDNA clone MGC:12903 IMAGE:3537086), complete cds. ACCESSION BC006104 VERSION BC006104.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2495) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2495) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (02-APR-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: DCTD/DTP cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 18 Row: f Column: 21 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 23510355. FEATURES Location/Qualifiers source 1..2495 /db_xref="H-InvDB:HIT000032606" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:12903 IMAGE:3537086" /tissue_type="Lung, small cell carcinoma" /clone_lib="NIH_MGC_7" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..2495 /gene="RIOK1" /gene_synonym="AD034" /gene_synonym="bA288G3.1" /gene_synonym="FLJ30006" /gene_synonym="MGC12903" /db_xref="GeneID:83732" /db_xref="HGNC:HGNC:18656" CDS 175..1881 /gene="RIOK1" /gene_synonym="AD034" /gene_synonym="bA288G3.1" /gene_synonym="FLJ30006" /gene_synonym="MGC12903" /codon_start=1 /product="RIO kinase 1 (yeast)" /protein_id="AAH06104.2" /db_xref="GeneID:83732" /db_xref="HGNC:HGNC:18656" /translation="MDYRRLLMSRVVPGQFDDADSSDSENRDLKTVKEKDDILFEDLQ DNVNENGEGEIEDEEEEGYDDDDDDWDWDEGVGKLAKGYVWNGGSNPQANRQTSDSSS AKMSTPADKVLRKFENKINLDKLNVTDSVINKVTEKSRQKEADMYRIKDKADRATVEQ VLDPRTRMILFKMLTRGIITEINGCISTGKEANVYHASTANGESRAIKIYKTSILVFK DRDKYVSGEFRFRHGYCKGNPRKMVKTWAEKEMRNLIRLNTAEIPCPEPIMLRSHVLV MSFIGKDDMPAPLLKNVQLSESKARELYLQVIQYMRRMYQDARLVHADLSEFNMLYHG GGVYIIDVSQSVEHDHPHALEFLRKDCANVNDFFMRHSVAVMTVRELFEFVTDPSITH ENMDAYLSKAMEIASQRTKEERSSQDHVDEEVFKRAYIPRTLNEVKNYERDMDIIMKL KEEDMAMNAQQDNILYQTVTGLKKDLSGVQKVPALLENQVEERTCSDSEDIGSSECSD TDSEEQGDHARPKKHTTDPDIDKKERKKMVKEAQREKRKNKIPKHVKKRKEKTAKTKK GK" BASE COUNT 805 a 460 c 586 g 644 t ORIGIN 1 gggtggtgga tctgtcggtc ccgttttccc gtcgcacgtg gtggccactg ttggcttctg 61 aatggtttgc aaggcggata tccacgccaa ggcctttgga tcggccgtgg gtacatccgt 121 ctgagccgtt cctttccatc gcagagcggc ggcctccggc ggcgctctcc agtcatggac 181 taccggcggc ttctcatgag ccgggtggtc cccgggcaat tcgacgacgc ggactcctct 241 gacagtgaaa acagagactt gaagacagtc aaagagaagg atgacattct gtttgaagac 301 cttcaagaca atgtgaatga gaatggtgaa ggtgaaatag aagatgagga ggaggagggt 361 tatgatgatg atgatgatga ctgggactgg gatgaaggag ttggaaaact cgccaagggt 421 tatgtctgga atggaggaag caacccacag gcaaatcgac agacctccga cagcagttca 481 gccaaaatgt ctactccagc agacaaggtc ttacggaaat ttgagaataa aattaattta 541 gataagctaa atgttactga ttccgtcata aataaagtca ccgaaaagtc tagacaaaag 601 gaagcagata tgtatcgcat caaagataag gcagacagag caactgtaga acaggtgttg 661 gatcccagaa caagaatgat tttattcaag atgttgacta gaggaatcat aacagagata 721 aatggctgca ttagcacagg aaaagaagct aatgtatacc atgctagcac agcaaatgga 781 gagagcagag caatcaaaat ttataaaact tctattttgg tgttcaaaga tcgggataaa 841 tatgtaagtg gagaattcag atttcgtcat ggctattgta aaggaaaccc taggaaaatg 901 gtgaaaactt gggcagaaaa agaaatgagg aacttaatca ggctaaacac agcagagata 961 ccatgtccag aaccaataat gctaagaagt catgttcttg tcatgagttt catcggtaaa 1021 gatgacatgc ctgcaccact cttgaaaaat gtccagttat cagaatccaa ggctcgggag 1081 ttgtacctgc aggtcattca gtacatgaga agaatgtatc aggatgccag acttgtccat 1141 gcagatctca gtgaatttaa catgctgtac cacggtggag gcgtgtatat cattgacgtg 1201 tctcagtccg tggagcacga ccacccacat gccttggagt tcttgagaaa ggattgcgcc 1261 aacgtcaatg atttctttat gaggcacagt gttgctgtca tgactgtgcg ggagctcttt 1321 gaatttgtca cagatccatc cattacacat gagaacatgg atgcttatct ctcaaaggcc 1381 atggaaatag catctcaaag gaccaaggaa gaacggtcta gccaagatca tgtggatgaa 1441 gaggtgttta agcgagcata tattcctaga accttgaatg aagtgaaaaa ttatgagagg 1501 gatatggaca taattatgaa attgaaggaa gaggacatgg ccatgaatgc ccaacaagat 1561 aatattctat accagactgt tacaggattg aagaaagatt tgtcaggagt tcagaaggtc 1621 cctgcactcc tagaaaatca agtggaggaa aggacttgtt ctgattcaga agatattgga 1681 agctctgagt gctctgacac agactctgaa gagcagggag accatgcccg ccccaagaaa 1741 cacaccacgg accctgacat tgataaaaaa gaaagaaaaa agatggtcaa ggaagcccag 1801 agagagaaaa gaaaaaacaa aattcctaaa catgtgaaaa aaagaaagga gaagacagcc 1861 aagacgaaaa aaggcaaata gaatgagaac catattatgt acagtcattt tcctcagttc 1921 cttttctcgc ctgaactctt aagctgcatc tggaagatgg cttattggtt ttaaccagat 1981 tgtcatcgtg gcactgtctg tgaagacgga ttcaaatgtt ttcatgtaac tatgtaaaaa 2041 gctctaagct ctagagtcta gatccagtca ctgactctgt ctggtgttga cagaggattt 2101 atttaagcta ttattttaat aaagaacttt gtacattttt atttttatat ttttttctct 2161 tacaaatatg tttttggaag catgataaat gtttaaatgt agtcaacatc tgtaactctt 2221 acatgagtgt ccagaggcac tcatgggaaa attggttttg ctttctttgt acacaccaga 2281 gacccatctg aggtcatctg attataaggc catgtttata taaagggaat ttcacccaca 2341 gttcagctgg ctgttgattt tcactgcaac tctgcctttg tgtgtattgg cgatcatttg 2401 taatgctctt acacttcgtc tttaatgttc tttttggagt taggacctct cagttcataa 2461 agttttttac aattcaaaaa aaaaaaaaaa aaaaa //