LOCUS BC006098 1122 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens processing of precursor 4, ribonuclease P/MRP subunit
(S. cerevisiae), mRNA (cDNA clone MGC:12747 IMAGE:2989197),
complete cds.
ACCESSION BC006098
VERSION BC006098.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1122)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1122)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-APR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Louis M. Staudt, M.D., Ph.D.
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 18 Row: b Column: 13
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 5729985.
FEATURES Location/Qualifiers
source 1..1122
/db_xref="H-InvDB:HIT000032602"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:12747 IMAGE:2989197"
/tissue_type="Lymph, Burkitt lymphoma"
/clone_lib="NIH_MGC_8"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1122
/gene="POP4"
/gene_synonym="RPP29"
/db_xref="GeneID:10775"
/db_xref="HGNC:HGNC:30081"
/db_xref="MIM:606114"
CDS 23..685
/gene="POP4"
/gene_synonym="RPP29"
/codon_start=1
/product="processing of precursor 4, ribonuclease P/MRP
subunit (S. cerevisiae)"
/protein_id="AAH06098.1"
/db_xref="GeneID:10775"
/db_xref="HGNC:HGNC:30081"
/db_xref="MIM:606114"
/translation="MKSVIYHALSQKEANDSDVQPSGAQRAEAFVRAFLKRSTPRMSP
QAREDQLQRKAVVLEYFTRHKRKEKKKKAKGLSARQRRELRLFDIKPEQQRYSLFLPL
HELWKQYIRDLCSGLKPDTQPQMIQAKLLKADLHGAIISVTKSKCPSYVGITGILLQE
TKHIFKIITKEDRLKVIPKLNCVFTVETDGFISYIYGSKFQLRSSERSAKKFKAKGTI
DL"
BASE COUNT 336 a 258 c 278 g 250 t
ORIGIN
1 gagcgccgga agcggtccga gaatgaagag tgtgatctac catgcattgt ctcagaaaga
61 ggcgaatgac tccgatgtcc agccttcagg agcacagcgg gccgaggcct tcgtgagggc
121 cttcctgaag cgcagcacgc cccgcatgag cccgcaggcc cgcgaggacc agctgcagcg
181 caaggcggtg gtcctggagt acttcacccg ccacaagcgc aaggagaaga agaagaaagc
241 caaaggcctc tctgccaggc aaaggaggga gctgcggctc tttgacatta aaccagagca
301 gcagagatac agccttttcc tccctctcca tgaactctgg aaacagtaca tcagggacct
361 gtgcagtggg ctcaagccag acacgcagcc acagatgatt caggccaagc tcttaaaggc
421 agatcttcac ggggctatta tttcagtgac aaaatccaaa tgcccctctt atgtgggtat
481 tacaggaatc cttctacagg aaacaaagca cattttcaaa attatcacca aagaagaccg
541 cctgaaagtt atccccaagc taaactgcgt gttcactgtg gaaaccgatg gctttatttc
601 ctacatttac gggagcaaat tccagcttcg gtcaagtgaa cggtctgcga agaagttcaa
661 agcgaaggga acgattgacc tgtgaattct ttgccgtcta aggcagttgt ttatgacagc
721 tgaaaactgg acactcccta aatgtccacc tttcagtgaa gagatagtta agccaattcc
781 atttatagac cacctccagc cagtgacgct ccgagttgag gatgttgaac aacatgggaa
841 ggtcgcagcg tactaagtga agaagtcaga ggacagagga atttctcttt ctaggagatt
901 ttcattttgt gtgactccca tggggaggaa cagactggca ggaagcacac cggggttaac
961 actggttgac ttgaatagga ttattcgatt tttaaaaata cttttccatg ttttctgagt
1021 gctctatgat aaatcagttg catctgtgat aatacaatac atatgtggac ataaacaggg
1081 atcaaataaa ggaggtattg ctgcaaaaaa aaaaaaaaaa aa
//