LOCUS BC006091 1500 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens tumor suppressing subtransferable candidate 4, mRNA
(cDNA clone MGC:12673 IMAGE:3677524), complete cds.
ACCESSION BC006091
VERSION BC006091.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1500)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1500)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-APR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Louis M. Staudt, M.D., Ph.D.
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 18 Row: j Column: 11
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 21071005.
FEATURES Location/Qualifiers
source 1..1500
/db_xref="H-InvDB:HIT000032597"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:12673 IMAGE:3677524"
/tissue_type="Lymph, Burkitt lymphoma"
/clone_lib="NIH_MGC_8"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1500
/gene="TSSC4"
/db_xref="GeneID:10078"
/db_xref="HGNC:HGNC:12386"
/db_xref="MIM:603852"
CDS 205..1194
/gene="TSSC4"
/codon_start=1
/product="tumor suppressing subtransferable candidate 4"
/protein_id="AAH06091.1"
/db_xref="GeneID:10078"
/db_xref="HGNC:HGNC:12386"
/db_xref="MIM:603852"
/translation="MAEAGTGEPSPSVEGEHGTEYDTLPSDTVSLSDSDSDLSLPGGA
EVEALSPMGLPGEEDSGPDEPPSPPSGLLPATVQPFHLRGMSSTFSQRSRDIFDCLEG
AARRAPSSVAHTSMSDNGGFKRPLAPSGRSPVEGLGRAHRSPASPRVPPVPDYVAHPE
RWTKYSLEDVTEVSEQSNQATALAFLGSQSLAAPTDCVSSFNQDPSSCGEGRVIFTKP
VRGVEARHERKRVLGKVGEPGRGGLGNPATDRGEGPVELAHLAGPGSPEAEEWGSPHG
GLQEVEALSGSVHSGSVPGLPPVETVGFHGSRKRSRDHFRNKSSSPEDPGAEV"
BASE COUNT 320 a 456 c 491 g 233 t
ORIGIN
1 agactgccga gcagccttga gccgttgagc agctgaacag aggccatgcc ggggcactcc
61 gaggcctgag acgaccacgc ctgtgccgct gaggaccttc atcagggctc cgtccacttg
121 gcccgcttgg ctgtccaatc acactccagt gtcaaccact ggcacccagc agccaagaga
181 ggtgtggcgt ggccctgggg acgcatggct gaggcaggaa caggtgagcc gtcccccagc
241 gtggagggcg aacacgggac ggagtatgac acgctgcctt ccgacacagt ctccctcagt
301 gactcggact ctgacctcag cttgcccggt ggtgctgaag tggaagcact gtccccgatg
361 gggctgcctg gggaggagga ttcaggtcct gatgagccgc cctcaccccc gtcaggcctc
421 ctcccagcca cggtgcagcc attccatctg agaggcatga gctccacctt ctcccagcgc
481 agccgtgaca tctttgactg cctggagggg gcggccagac gggctccatc ctctgtggcc
541 cacaccagca tgagtgacaa cggaggcttc aagcggcccc tagcgccctc aggccggtct
601 ccagtggaag gcctgggcag ggcccatcgg agccctgcct caccaagggt gcctccggtc
661 cccgactacg tggcacaccc cgagcgctgg accaagtaca gcctggaaga tgtgaccgag
721 gtcagcgagc agagcaatca ggccaccgcc ctggccttcc tgggctccca gagcctggct
781 gcccccactg actgcgtgtc ctccttcaac caggatccct ccagctgtgg ggaggggagg
841 gtcatcttca ccaaaccagt ccgaggggtc gaagccagac acgagaggaa gagggtcctg
901 gggaaggtgg gagagccagg caggggcggc cttgggaatc ctgccacaga caggggcgag
961 ggccctgtgg agctggccca tctggccggg cccgggagcc cagaggctga ggagtggggc
1021 agcccccatg gaggcctgca ggaggtggag gcactgtcag ggtctgtcca cagtgggtct
1081 gtgccaggtc tcccgccggt ggaaactgtt ggcttccatg gcagcaggaa gcggagtcga
1141 gaccacttcc ggaacaagag cagcagcccc gaggacccag gtgctgaggt ctgagaggga
1201 gatggcccag cctgacccca ctggccactg ccatcctgct gccttcccag tggggctggt
1261 cagggggcag cctggccact gcctagctgg aatgggagga agcctgcagg tggcaccggt
1321 ggccctggct gcagttctgg gcagcatcct cccaagcaga gaccttgctg aagctcctgg
1381 ggtgtggggt gtgggctgga agcactggct ccctggtagg gacaataaag gttttgggtc
1441 tttcaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaac
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