LOCUS BC006086 3216 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens DnaJ (Hsp40) homolog, subfamily C, member 11, mRNA
(cDNA clone MGC:12593 IMAGE:3946414), complete cds.
ACCESSION BC006086
VERSION BC006086.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3216)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3216)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-APR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 18 Row: l Column: 5.
FEATURES Location/Qualifiers
source 1..3216
/db_xref="H-InvDB:HIT000258912"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:12593 IMAGE:3946414"
/tissue_type="Lung, small cell carcinoma"
/clone_lib="NIH_MGC_7"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..3216
/gene="DNAJC11"
/gene_synonym="dJ126A5.1"
/gene_synonym="FLJ10737"
/gene_synonym="RP1-126A5.3"
/db_xref="GeneID:55735"
/db_xref="HGNC:HGNC:25570"
CDS 3..1682
/gene="DNAJC11"
/gene_synonym="dJ126A5.1"
/gene_synonym="FLJ10737"
/gene_synonym="RP1-126A5.3"
/codon_start=1
/product="DnaJ (Hsp40) homolog, subfamily C, member 11"
/protein_id="AAH06086.1"
/db_xref="GeneID:55735"
/db_xref="HGNC:HGNC:25570"
/translation="MATALSEEELDNEDYYSLLNVRREASSEELKAAYRRLCMLYHPD
KHRDPELKSQAERLFNLVHQAYEVLSDPQTRAIYDIYGKRGLEMEGWEVVERRRTPAE
IREEFERLQREREERRLQQRTNPKGTISVGVDATDLFDRYDEEYEDVSGSSFPQIEIN
KMHISQSIEAPLTATDTAILSGSLSTQNGNGGGSINFALRRVTSAKGWGELEFGAGDL
QGPLFGLKLFRNLTPRCFVTTNCALQFSSRGIRPGLTTVLARNLDKNTVGYLQWRWGI
QSAMNTSIVRDTKSSHFTVALQLGIPHSFALISYQHKFQDDDQTRVKGSLKAGFFGTV
VEYGAERKISRHSVLGAAVSVGVPQGVSLKVKLNRASQTYFFPIHLTDQLLPSAMFYA
TVGPLVVYFAMHRLIIKPYLRAQKEKELEKQRESAATDVLQKKQEAESAVRLMQESVR
RIIEAEESRMGLIIVNAWYGKFVNDKSRKSEKVKVIDVTVPLQCLVKDSKLILTEASK
AGLPGFYDPCVGEEKNLKVLYQFRGVLHQVMVLDSEALRIPKQSHRIDTDG"
BASE COUNT 783 a 873 c 889 g 671 t
ORIGIN
1 agatggcgac ggccttgagc gaggaggagc tggacaatga agactattac tcgttgctga
61 acgtgcgcag ggaggcctct tctgaagagc tgaaagctgc ctaccggagg ctctgtatgc
121 tctaccatcc agacaagcac agagacccag agctcaagtc acaggcggaa cgactgttta
181 accttgttca ccaggcttat gaagtgctta gtgaccccca aaccagggcc atctatgata
241 tatatgggaa gagaggactg gaaatggaag gatgggaggt tgtggaaagg aggagaaccc
301 ctgctgaaat tcgagaggag tttgagcggc tgcagagaga gagagaagag aggagattgc
361 agcagcgaac caatcccaag ggaacgatca gcgttggagt agatgccacc gacctttttg
421 atcgctatga tgaggagtat gaagatgtgt ccggcagtag ctttccgcag attgaaatta
481 ataaaatgca catatcccag tccattgagg cacccttgac agcgacagac acagccatcc
541 tctctggaag cctctcaacc cagaatggaa atggaggagg ttccattaac tttgcgctca
601 gacgagtaac ttcggcaaag ggatggggag agttggaatt tggagctgga gacctacagg
661 ggcctttgtt cggtctcaag ctgttccgta atctcacacc aagatgcttt gtgacaacaa
721 actgtgctct gcagttttca tcccgtggaa tccgacccgg cctgaccact gtcctagctc
781 ggaacctaga caagaacacc gtgggctacc tgcagtggcg atggggtatc cagtcagcca
841 tgaacactag catcgtccga gacactaaaa gcagccactt cactgtggcc ctgcagctgg
901 gaatccctca ctcctttgca ctgatcagct atcagcacaa attccaagat gacgatcaga
961 ctcgtgtgaa aggatccctc aaagcaggct tctttgggac ggtggtggag tacggagctg
1021 agaggaagat ctccaggcac agcgttttgg gtgcagctgt cagcgttgga gttccacagg
1081 gcgtttctct caaagtcaag ctcaacaggg ccagtcagac atacttcttc cctattcact
1141 tgacggacca gcttctgccc agcgccatgt tctatgccac cgtggggcct ctagtggtct
1201 actttgccat gcaccgtctg atcatcaaac catacctcag ggctcagaaa gagaaggaat
1261 tggagaagca gagggaaagc gccgccaccg atgtgctgca gaagaagcaa gaggcggagt
1321 ccgctgtccg gctgatgcag gaatctgtcc gaaggataat tgaggcagaa gagtccagaa
1381 tgggcctcat catcgtcaat gcctggtacg ggaagtttgt caatgacaag agcaggaaga
1441 gcgagaaggt gaaggtgatt gacgtgactg tgcccctgca gtgcctggtg aaggactcga
1501 agctcatcct cacggaggcc tccaaggctg ggctgcctgg cttttatgac ccgtgtgtgg
1561 gggaagagaa gaacctgaaa gtgctctatc agttccgggg cgtcctgcat caggtgatgg
1621 tgctggacag tgaggccctc cggataccaa agcagtccca caggatcgat acagatggat
1681 aaactgccaa gaaccagatt tttaaaaggc cgcaaaaaat cttttcctgg gagtctacaa
1741 atttggaaat gaaaaaaccc agacatcaga tgtttttatt ttatattatt attatagaag
1801 gtggtaccat tatcaattat gtgaagggac atgcagacac cccagctttt gagggtgctg
1861 ggggtaggac tgaggcagcc ccactgggaa ccagactgca gcctggccca tggctgtttt
1921 cccaaggatc agttcctgga gggaagggct ctggccctga ctccgctgtg tcccgagcac
1981 acgtgctgac cgcagcccgc cgccctgtag ttcttggctg ggtctggagg tgtctgtgga
2041 gcaccctgcc ctcaccacag gagcgtgagc cacttctgca gtccacgctg aacatgggaa
2101 acaacctgaa aagcaggcag gcctcccggt cagggagcct ctgctgtgct ggcttcccat
2161 gaccacctcc tcttgctgaa atattactgc ttgaatctgg agcagattgc gggtttataa
2221 aactgctttt tatctgagaa caaacgggtt tggaaattag tcgtcttttt tccccactcc
2281 cagagctgct caagtcattc caccggcccc ctcggcttgg gacagggtag tgtaactccc
2341 gatcccaggg cctagccctg acacaggtgg cttcccgtat cccggtggga aaacgccctg
2401 ccaccagcgg gcttgagctg gcctgtgtcc ctccaccgcc tgcaccaccc acctccagag
2461 tgcagtgctg ggcaagggca gctcaagagg acaggaccag gcgcttggca agacatcaga
2521 cacacccaac ccaaaggcgt ggaccccagg cccggcccgt ggtacccagc aggtggcact
2581 gcagctcccc gctcctgcag gtccagcgtc ctcacaggaa caccagggcc tgtgctccgg
2641 agccttcctt cagacccttc ctccacgtgc ccacttggga tgcagaatgc agcggagcta
2701 ggaccccctc cacggcctgg acctcggctg cagtaaagtt acgtgaggcc tgtctctcgg
2761 ggcctggaag tggcagccat cagttgctct tgctgacccc tcggagcaag cgccgcacag
2821 gtggtggctg agacagctgg cgcggggggc cccaagctgc gccggcctcc agcccaccca
2881 cagctgttgc tgaagtcagg ccaacctccc cagcactggt atctgagtaa cggctaagaa
2941 cctccttcct ctggttttga aaagcagttc gggttgtcca attctgtaac attcatctcc
3001 attttttaaa aaggtttctc tgacggcccc acggcccgag ccgcggtgag cgtcgtgttg
3061 catgagcctg ggccccgggc ttcccgtgcg cctctgccgc aggtgcttct gggcacccat
3121 cctctgcgtt tcatttgcag tcgactgtac agaaggcact caccacaata aacctttcct
3181 gaaagcaaaa aaaaaaaaaa aaaaaaaaaa aaaaaa
//