LOCUS BC005980 1496 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens ubiquitin-conjugating enzyme E2D 1 (UBC4/5 homolog,
yeast), mRNA (cDNA clone MGC:14673 IMAGE:4106710), complete cds.
ACCESSION BC005980
VERSION BC005980.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1496)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1496)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-APR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 21 Row: h Column: 13.
FEATURES Location/Qualifiers
source 1..1496
/db_xref="H-InvDB:HIT000032570"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:14673 IMAGE:4106710"
/tissue_type="Bone marrow, acute myelogenous leukemia"
/clone_lib="NIH_MGC_55"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..1496
/gene="UBE2D1"
/gene_synonym="E2(17)KB1"
/gene_synonym="UBC4/5"
/gene_synonym="UBCH5"
/gene_synonym="UBCH5A"
/db_xref="GeneID:7321"
/db_xref="HGNC:HGNC:12474"
/db_xref="MIM:602961"
CDS 195..638
/gene="UBE2D1"
/gene_synonym="E2(17)KB1"
/gene_synonym="UBC4/5"
/gene_synonym="UBCH5"
/gene_synonym="UBCH5A"
/codon_start=1
/product="ubiquitin-conjugating enzyme E2D 1 (UBC4/5
homolog, yeast)"
/protein_id="AAH05980.1"
/db_xref="GeneID:7321"
/db_xref="HGNC:HGNC:12474"
/db_xref="MIM:602961"
/translation="MALKRIQKELSDLQRDPPAHCSAGPVGDDLFHWQATIMGPPDSA
YQGGVFFLTVHFPTDYPFKPPKIAFTTKIYHPNINSNGSICLDILRSQWSPALTVSKV
LLSICSLLCDPNPDDPLVPDIAQIYKSDKEKYNRHAREWTQKYAM"
BASE COUNT 461 a 311 c 261 g 463 t
ORIGIN
1 acactcgcgc acactcgcgc tcgggcgcac acggagcagg gaccggcgcc cggagcgagc
61 cagggagcgg ctaaccgggg acccaccgcg cggagccagc ctagctgcca gcgagcccaa
121 cccgcgacga cccacgcccc tgagccccgc agccgacccc tgccggccgg tgtccccacc
181 gccatccctg acccatggcg ctgaagagga ttcagaaaga attgagtgat ctacagcgcg
241 atccacctgc tcactgttca gctggacctg tgggagatga cttgttccac tggcaagcca
301 ctattatggg gcctcctgat agcgcatatc aaggtggagt cttctttctc actgtacatt
361 ttccgacaga ttatcctttt aaaccaccaa agattgcttt cacaacaaaa atttaccatc
421 caaacataaa cagtaatgga agtatttgtc tcgatattct gaggtcacaa tggtcaccag
481 ctctgactgt atcaaaagtt ttattgtcca tatgttctct actttgtgat cctaatccag
541 atgacccctt agtaccagat attgcacaaa tctataaatc agacaaagaa aaatacaaca
601 gacatgcaag agaatggact cagaaatatg caatgtaaaa atcaaaaaca ttttcatata
661 taccagagta ctgtaaaatc taggtttttt tcaacattag cagtaaattg agcactgttt
721 actgtttcat tgtaccatga aaccatttga tttttaccca ttttaaatgt gtttctgaag
781 caagacaaaa caaacttcca aaaataccct taagactgtg atgagagcat ttatcatttt
841 gtatgcattg agaaagacat ttattatggt ttttaagata cttggacatc tgcatcttca
901 gcttacaaga tctacaatgc agctgaaaag caaccaaatt attttttgct gaaactagat
961 gtttttacat gagaaatact gtatgtgttg tctaagatgt cagttttata aatctgtatt
1021 cagatttcat tctttgttag ctcactttat aatttgtatt tttttactgt atagactaaa
1081 tatattctat ttacatgtat gtcaactcat tacttttttc ctgtgaacag tattgaaaaa
1141 ccccaacggc tgataattaa gtgaattaac tgtgtctccc ttgtcttagg atattctgta
1201 gattgattgc agatttctta aatctgaaat gatctttaca ctgtaattct cagcatactg
1261 attatggaga aacacttgtt ttgattttgt tatacttgac ttaactttat tgcaatgtga
1321 attaattgca ctgctaagta ggaagatgtg taacttttat ttgttgctat tcacatttga
1381 attttttcct gtataggcaa tattatattg acacctttta cagatcttac tgtagctttt
1441 tccatataaa taaaatgctt tttcggaaaa aaaaaaaaaa aaaaaaaaaa aaaaaa
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