LOCUS BC005937 1833 bp mRNA linear HUM 11-SEP-2007 DEFINITION Homo sapiens Vps20-associated 1 homolog (S. cerevisiae), mRNA (cDNA clone MGC:14555 IMAGE:4081455), complete cds. ACCESSION BC005937 VERSION BC005937.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1833) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1833) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (02-APR-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: CLONTECH Laboratories, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 21 Row: i Column: 21 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 21361740. FEATURES Location/Qualifiers source 1..1833 /db_xref="H-InvDB:HIT000032536" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:14555 IMAGE:4081455" /tissue_type="Bladder, carcinoma" /clone_lib="NIH_MGC_53" /lab_host="DH10B" /note="Vector: pDNR-LIB" gene 1..1833 /gene="VTA1" /gene_synonym="DRG-1" /gene_synonym="DRG1" /gene_synonym="HSPC228" /gene_synonym="LIP5" /gene_synonym="My012" /gene_synonym="SBP1" /db_xref="GeneID:51534" /db_xref="HGNC:HGNC:20954" /db_xref="MIM:610902" CDS 12..935 /gene="VTA1" /gene_synonym="DRG-1" /gene_synonym="DRG1" /gene_synonym="HSPC228" /gene_synonym="LIP5" /gene_synonym="My012" /gene_synonym="SBP1" /codon_start=1 /product="VTA1 protein" /protein_id="AAH05937.1" /db_xref="GeneID:51534" /db_xref="HGNC:HGNC:20954" /db_xref="MIM:610902" /translation="MAALAPLPPLPAQFKSIQHHLRTAQEHDKRDPVVAYYCRLYAMQ TGMKIDSKTPECRKFLSKLMDQLEALKKQLGDNEAITQEIVGCAHLENYALKMFLYAD NEDRAGRFHKNMIKSFYTASLLIDVITVFGELTDENVKHRKYARWKATYIHNCLKNGE TPQAGPVGIEEDNDIEENEDAGAASLPTQPTQPSSSSTYDPSNMPSGNYTGIQIPPGA HAPANTPAEVPHSTGVASNTIQPTPQTIPAIDPALFNTISQGDVRLTPEDFARAQKYC KYAGSALQYEDVSTAVQNLQKALKLLTTGRE" BASE COUNT 618 a 335 c 357 g 523 t ORIGIN 1 cgggagtaga gatggccgcg cttgcaccgc tgcccccgct ccccgcacag ttcaagagca 61 tacagcatca tctgaggacg gctcaggagc atgacaagcg agaccctgtg gtggcttatt 121 actgtcgttt atacgcaatg cagactggaa tgaagatcga tagtaaaact cctgaatgtc 181 gcaaattttt atcaaagtta atggatcagt tagaagctct aaagaagcag ttgggtgata 241 atgaagctat tactcaagaa atagtgggct gtgcccattt ggagaattat gctttgaaaa 301 tgtttttgta tgcagacaat gaagatcgtg ctggacgatt tcacaaaaac atgatcaagt 361 ccttctatac tgcaagtctt ttgatagatg tcataacagt atttggagaa ctcactgatg 421 aaaatgtgaa acacaggaag tatgccagat ggaaggcaac atacatccat aattgtttaa 481 agaatgggga gactcctcaa gcaggccctg ttggaattga agaagataat gatattgaag 541 aaaatgaaga tgctggagca gcctctctgc ccactcagcc aactcagcca tcatcatctt 601 caacttatga cccaagcaac atgccatcag gcaactatac tggaatacag attcctccgg 661 gtgcacacgc tccagctaat acaccagcag aagtgcctca cagcacaggt gtagcaagta 721 atactatcca acctactcca cagactatac ctgccattga tcccgcactt ttcaatacaa 781 tttcccaggg ggatgttcgt ctaaccccag aagactttgc tagagctcag aagtactgca 841 aatatgctgg cagtgctttg cagtatgaag atgtaagcac tgctgtccag aatctacaaa 901 aggctctcaa gttactgacg acaggcagag aatgaagcct ttgtatgaca gacccatgta 961 tttttggcat gaggaactaa cagtccatta ctctatcttc agcctatcag gatcacagtt 1021 ttcattgtcc atttactaga ttcaatcgtc tctgagtata tagggctgat gttagcaaga 1081 ccctaaaaat gtccattgaa ccctgcttca aaaaatgaaa acacacctct ataaaatgtg 1141 tactgggaat aagctttgta tttacataca ttaggggaat tttttaaaat ctgtaatgtt 1201 tggacaaaca gatgatatta ctttgctata aaattataaa tgtaactttt aataaagata 1261 gccagaatat tctaaattag aaattacgtt tttgtttccc tcaagacata aaacaaatat 1321 aaacattcta aactgctgga tgaatctgaa aagacattaa gttcaaattt taatttattc 1381 tcatattaaa tataactcca ttaaaagttt aaaatttcat gggagaaaat ataataaggt 1441 aaagaggtag aatcactttc agacttaaga ataatgttga tttcccaagt gctttacctt 1501 atctgttaaa gcgtaagatg aattggtatt tgcttcatag gcagtttgac tgcatgtatt 1561 agagaatgaa aagaagatat ttgtagtaat gcctggaaac ttggtgcttt aaattaaggt 1621 actcctctgc tgctgtagaa tggattccac acagtggata gctatgggtg attcagagta 1681 ttatgtttag attcccattt gttaagttta taagttttgt ggggaattat gaacttactg 1741 tgtactacct gcatttgtgc tgtgtgaaaa ataaatacaa ggattcgttt agctaattca 1801 actaaaaaaa aaaaaaaaaa aaaaaaaaaa aaa //