LOCUS BC005934 1478 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens suppressor of IKK epsilon, mRNA (cDNA clone MGC:14549
IMAGE:4249034), complete cds.
ACCESSION BC005934
VERSION BC005934.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1478)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1478)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-APR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: CLONTECH
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 21 Row: e Column: 8
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 13376618.
FEATURES Location/Qualifiers
source 1..1478
/db_xref="H-InvDB:HIT000032533"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:14549 IMAGE:4249034"
/tissue_type="Prostate"
/clone_lib="NIH_MGC_83"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..1478
/gene="SIKE"
/gene_synonym="FLJ21168"
/gene_synonym="RP5-1000E10.4"
/db_xref="GeneID:80143"
CDS 51..674
/gene="SIKE"
/gene_synonym="FLJ21168"
/gene_synonym="RP5-1000E10.4"
/codon_start=1
/product="suppressor of IKK epsilon"
/protein_id="AAH05934.1"
/db_xref="GeneID:80143"
/translation="MSCTIEKILTDAKTLLERLREHDAAAESLVDQSAALHRRVAAMR
EAGTALPDQYQEDASDMKDMSKYKPHILLSQENTQIRDLQQENRELWISLEEHQDALE
LIMSKYRKQMLQLMVAKKAVDAEPVLKAHQSHSAEIESQIDRICEMGEVMRKAVQVDD
DQFCKIQEKLAQLELENKELRELLSISSESLQARKENSMDTASQAIK"
BASE COUNT 460 a 281 c 319 g 418 t
ORIGIN
1 gagcgagtcg cgtagctgag cccggcaggg gctggggtgg tgctgctgct atgagctgca
61 ccatcgagaa gatcctgaca gacgccaaga cgctgctgga gaggctacgg gagcacgatg
121 cggccgccga gtcgctggtg gatcagtcgg cggcgctgca ccggcgggta gcagctatgc
181 gggaggcggg gacagcgctt ccggaccagt atcaagagga tgcatccgat atgaaggaca
241 tgtccaaata caaacctcac attctgctgt cccaagagaa cacacagatt agagacttgc
301 aacaggaaaa cagagagcta tggatttcct tggaggaaca ccaggatgct ttggaactta
361 tcatgagcaa atatcggaaa cagatgttac agttaatggt tgctaaaaaa gcggtggatg
421 ctgaaccagt cctgaaagct caccagtctc actctgcaga aattgagagt cagattgaca
481 gaatctgtga aatgggagaa gtgatgagga aagcagttca ggtggatgat gaccagtttt
541 gtaagattca ggaaaaatta gcccaattag agcttgaaaa taaggaactt cgagaattat
601 tgtccatcag cagtgagtct cttcaagcca gaaaggaaaa ctcaatggac actgcttccc
661 aagccatcaa ataactgaac tctgaatgat ggctggagat tgtctatcaa ggaaggaagt
721 tactgtcttc ccattcaagt actgtccatt aagtgtcttg cctcagattt gatttaatct
781 taattaaagg tatcaggtgg caatttagaa ttccagtcaa tattggctgt ccacagttct
841 cagatgtgtt aatgtgaata ctacatgctg aatttcacca ttcctttctc aaagagacta
901 cttttaattt tcatttctgg gaccttgatt tatataaact atgttttcag ttctttgtta
961 tttttcacat ctctgaaact ttgagcattt tttataagcc agcaatttat tttacatagc
1021 attgtaaaat acacttctag gaaattttag gaaagattta actgtttaaa tctatttggc
1081 ataaaccttg attttttttt tccatttgac aaaaataata caattccaca gaactagatc
1141 agcagattct ctggtttgta atgtcattca cctgagacat tttaagtctc tctggtgcta
1201 agaattggca ctttatagcc tggtgccttt acttttaatt tgagagaacc tactgctagt
1261 cccaggaaac acacttggaa ataagtcagc tatttttttt gcccagtgat gctatagttg
1321 tcatattgtc caaagttcat attgttcaaa gctgaggagc ttgtcctgtg tatgtgaatg
1381 cacacatgtg cacttagttc aaatactaaa agtagctttt attaaatata atcagccgaa
1441 aacacacaca aaaaaaaaaa aaaaaaaaaa aaaaaaaa
//