LOCUS BC005891 1725 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens melanoma antigen family C, 2, mRNA (cDNA clone MGC:871
IMAGE:3050294), complete cds.
ACCESSION BC005891
VERSION BC005891.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1725)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1725)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-APR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC005891.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 3 Row: f Column: 20
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 29337297.
FEATURES Location/Qualifiers
source 1..1725
/db_xref="H-InvDB:HIT000032502"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:871 IMAGE:3050294"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_20"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1725
/gene="MAGEC2"
/gene_synonym="CT10"
/gene_synonym="HCA587"
/gene_synonym="MGC13377"
/db_xref="GeneID:51438"
/db_xref="HGNC:HGNC:13574"
/db_xref="MIM:300468"
CDS 80..1201
/gene="MAGEC2"
/gene_synonym="CT10"
/gene_synonym="HCA587"
/gene_synonym="MGC13377"
/codon_start=1
/product="melanoma antigen family C, 2"
/protein_id="AAH05891.1"
/db_xref="GeneID:51438"
/db_xref="HGNC:HGNC:13574"
/db_xref="MIM:300468"
/translation="MPPVPGVPFRNVDNDSPTSVELEDWVDAQHPTDEEEEEASSASS
TLYLVFSPSSFSTSSSLILGGPEEEEVPSGVIPNLTESIPSSPPQGPPQGPSQSPLSS
CCSSFSWSSFSEESSSQKGEDTGTCQGLPDSESSFTYTLDEKVAELVEFLLLKYEAEE
PVTEAEMLMIVIKYKDYFPVILKRAREFMELLFGLALIEVGPDHFCVFANTVGLTDEG
SDDEGMPENSLLIIILSVIFIKGNCASEEVIWEVLNAVGVYAGREHFVYGEPRELLTK
VWVQGHYLEYREVPHSSPPYYEFLWGPRAHSESIKKKVLEFLAKLNNTVPSSFPSWYK
DALKDVEERVQATIDTADDATVMASESLSVMSSNVSFSE"
BASE COUNT 429 a 369 c 419 g 508 t
ORIGIN
1 gccaggagtc aaggcctgtt ggatctcatc atccatatcc ctgttgatac gtttacctgc
61 tgctcctgaa gaagtcgtca tgcctcccgt tccaggcgtt ccattccgca acgttgacaa
121 cgactccccg acctcagttg agttagaaga ctgggtagat gcacagcatc ccacagatga
181 ggaagaggag gaagcctcct ccgcctcttc cactttgtac ttagtatttt ccccctcttc
241 tttctccaca tcctcttctc tgattcttgg tggtcctgag gaggaggagg tgccctctgg
301 tgtgatacca aatcttaccg agagcattcc cagtagtcct ccacagggtc ctccacaggg
361 tccttcccag agtcctctga gctcctgctg ctcctctttt tcatggagct cattcagtga
421 ggagtccagc agccagaaag gggaggatac aggcacctgt cagggcctgc cagacagtga
481 gtcctctttc acatatacac tagatgaaaa ggtggccgag ttagtggagt tcctgctcct
541 caaatacgaa gcagaggagc ctgtaacaga ggcagagatg ctgatgattg tcatcaagta
601 caaagattac tttcctgtga tactcaagag agcccgtgag ttcatggagc ttctttttgg
661 ccttgccctg atagaagtgg gccctgacca cttctgtgtg tttgcaaaca cagtaggcct
721 caccgatgag ggtagtgatg atgagggcat gcccgagaac agcctcctga ttattattct
781 gagtgtgatc ttcataaagg gcaactgtgc ctctgaggag gtcatctggg aagtgctgaa
841 tgcagtaggg gtatatgctg ggagggagca cttcgtctat ggggagccta gggagctcct
901 cactaaagtt tgggtgcagg gacattacct ggagtatcgg gaggtgcccc acagttctcc
961 tccatattat gaattcctgt ggggtccaag agcccattca gaaagcatca agaagaaagt
1021 actagagttt ttagccaagc tgaacaacac tgttcctagt tcctttccat cctggtacaa
1081 ggatgctttg aaagatgtgg aagagagagt ccaggccaca attgataccg cagatgatgc
1141 cactgtcatg gccagtgaaa gcctcagtgt catgtccagc aacgtctcct tttctgagtg
1201 aagtctagga tagtttcttc cccttgtgtt tgaacagggc agtttaggtt ctaggtagtg
1261 gagggccagg tggggctcga ggaacgtagt gttctttgca tttctgtccc atatgggtga
1321 tgtagagatt tacctgtttt tcagtatttt ctaaatgctt ttcctttgaa tagcaggtag
1381 ttagcttcag agtgttaatt tatgaatatt agtcgcacat gtattgctct ttatctggtt
1441 taagagtaac agtttgatat tttgttaaaa aaatggaaat accttctccc ttattttgtg
1501 atctgtaaca gggtagtgtg gtattgtaat aggcattttt tttttttttt acaatgtgca
1561 ataactcagc agttaaatag tggaacaaaa ttgaagggtg gtcagtagtt tcatttcctt
1621 gtcctgctta ttcttttgtt cttgaaaatt atatatacct ggctttgctt agcttgttga
1681 agaaagtagc agaaattaaa tcttaataaa aaaaaaaaaa aaaaa
//