LOCUS BC005852 2297 bp mRNA linear HUM 16-SEP-2005
DEFINITION Homo sapiens splA/ryanodine receptor domain and SOCS box containing
1, mRNA (cDNA clone IMAGE:2966987), partial cds.
ACCESSION BC005852
VERSION BC005852.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2297)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2297)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-APR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Oct 28, 2003 this sequence version replaced BC005852.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 3 Row: c Column: 15.
FEATURES Location/Qualifiers
source 1..2297
/db_xref="H-InvDB:HIT000086540"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:2966987"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_20"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..2297
/gene="SPSB1"
/gene_synonym="SSB-1"
/gene_synonym="SSB1"
/db_xref="GeneID:80176"
CDS <1..325
/gene="SPSB1"
/gene_synonym="SSB-1"
/gene_synonym="SSB1"
/codon_start=2
/product="SPSB1 protein"
/protein_id="AAH05852.2"
/db_xref="GeneID:80176"
/translation="PDETFIVPDSFLVALDMDDGTLSFIVDGQYMGVAFRGLKGKKLY
PVVSAVWGHCEIRMRYLNGLDPEPLPLMDLCRRSVRLALGRERLGEIHTLPLPASLKA
YLLYQ"
BASE COUNT 503 a 660 c 571 g 563 t
ORIGIN
1 accagatgag acattcattg tccctgactc cttcctggta gccctggaca tggacgacgg
61 gactctgagc ttcattgtgg atggacagta catgggagtg gcttttcggg gactcaaggg
121 caaaaaactg tatcctgtag tgagtgccgt ctggggccac tgtgagatcc gaatgcgcta
181 cttgaacgga ctcgatcccg agccgctgcc gctcatggat ttgtgccgtc gctcggtgcg
241 cctggccctg gggagggagc gcctggggga gatccacacg ctgccgctgc cggcttccct
301 caaggcctac ctcctctacc agtgacgttc gccatcatac cgccagcgcg acagccacct
361 ggtgccaact caatgagccg cctgccgctg gggccgccgc accctgcacc ttggaccggc
421 atccgtagcc atggacagag gtccctggtc ttccctcatc ctccgtggct gcctccatgg
481 gacaaggacc gattccaaca caggctcctc tttccccctt cccgacatca gcagaaggca
541 gcatccctgc atgccgtccg tatacaaccc ctctttgaaa aaagacacag agaataaact
601 cctacgaaag ccctacattg agctccaatc tgctcggggt gggacgggtg cttcccacac
661 ctctgggaga aggctgcagc cacctggggg tcccagggtg gtgggggtgg caggtggtac
721 cacagctctg agagcagata ccaggggtac taagaggtgc ttagacaagg gctggtgccc
781 ggcccagggt gcccagcggg gccatgccat ggcagataaa gctcaggacg tcaaaaactc
841 accatggacc ccaaggcaga aaccaagaac tgtctgcagg caaataagca cccagcaccc
901 atcctggctg ccggtgcccc gtaccctgta tttattcttt taacaataac aaaagccatt
961 tatttattcc atctagaaag gaaaccctgt ttcagtcccc tctctctggc tgttctgtta
1021 ctttccttcc acctgtgccc tccctgggat atgtatgcct cgcccgccct ccctgggcac
1081 atgtgcacac gtgcccaggc acaagtatgt ctctgggtcc cttgccctgc agtttccagg
1141 gggctctgct ccaagttccc tagcgggccc ctcagggaga aatagcctca cgtgcaatct
1201 gggtgtcttc gggggcccgt ctggaagggc tgcagcaatt cccctgtgtc tccaggtaac
1261 cagctaactc ttgggctcag gcacccttgc acagggttgc atttctttag tcttctgtgg
1321 gtcttttgat gtgggtttga ttttgctttt gcttttctag ctgagatttc ccaagtgcat
1381 cctcagaagc tctgggtgtg ccagaggacc cccagaacta agaagggagg gcgagtgggt
1441 ctccattccc cgagaagcca ggggcagggt gggatgggga agaccaggag cagagtcgag
1501 cctcacagaa gccagcgcgg gtctctgctc agcaccccag ccggggctct ggacccaggg
1561 taacagcccc agttcatccc aacccctctc agagcctcaa gaggggtagc tcggctgccg
1621 gaagagaggg gtgccctatc cctggcaacc cctccacgta gcgtacccca gcacctgcca
1681 ccgcctttgc catttctttg agcttgaagt taactctctt agagtctaac tttggttcat
1741 ttctgcacag gtacaataga tgactttatt tgtttaaaat gtttaatata tatacataca
1801 tatatatata tttgtctgta agaattatgt tttaaacagc tgctgtagag tacctttttt
1861 taagtaaatc ttacagtgga gtatattttt taaagcacaa aattggtgcc aagactgggt
1921 gagaaatgta cattaccccc ttattatttt gacggttttt tttttcgggg caggggacct
1981 tacctgtaag acttttaaag attttcctcc ctcctgtttc aggtgggtca cattctgatg
2041 aatgtttccc ttgtacagat cccagcttat ggccttgacc cagccgtcct cacagatgcc
2101 gggtgaccct ctagctctct ctgcatctcc caccccccga caccctggga ccctcgaccc
2161 cacccttctt tcctaccagc ccagagcctt gtggcttgta cagttttgaa actcccgttc
2221 tattttatga tggttgataa tagtcagtaa cctaataaag gaacgtttgt taaaatatca
2281 aaaaaaaaaa aaaaaaa
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