LOCUS BC005399 1884 bp mRNA linear HTC 27-OCT-2008
DEFINITION Homo sapiens leucine-rich repeats and IQ motif containing 1, mRNA
(cDNA clone IMAGE:3839182), with apparent retained intron.
ACCESSION BC005399
VERSION BC005399.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1884)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1884)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (27-MAR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 16 Row: h Column: 3
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 50083284
This clone has the following problem: retained intron.
FEATURES Location/Qualifiers
source 1..1884
/db_xref="H-InvDB:HIT000032441"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3839182"
/tissue_type="Brain, glioblastoma"
/clone_lib="NIH_MGC_57"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
BASE COUNT 619 a 307 c 418 g 540 t
ORIGIN
1 ggatacgctt tgtgtagcgg ctatgggcgc tgtcttacaa caaagccaag gaatctcgct
61 gctgagggca gttctgtgct ttattatgaa gaataatgga cgatgatgat gcaaagctca
121 aagcagaaat agaagctgaa ttggataaac tcagcatttc ctccttggaa aaagaagaca
181 ttgagagtga tgcaaaatca gaaacccaga gtgatgatag tgatacagat tcagttgaat
241 taccagaatc agttcttcac tgtattaaca tcataaagaa caggagtaaa gctgttgaag
301 agctcattct tcaggacctg gaagatattt taagctgtag ttatggagca gtttctaata
361 atcatatgca tttaagaaca ggactatcaa ctgaatatga agaaagttca gagcaattaa
421 ttaagatatt atctgaaata gaaaaagaag aatttatgag aagtaaaacc gattgtgcca
481 ctcctgattt tgttcctgag cctagtcctc atgacttgcc tatggatgaa catgttttac
541 cagatgatgc tgatataaat tttggatact gtgaagtgga agaaaaatgt agacagtctt
601 ttgaggcttg gcaagagaaa cagaaggaat tagaagataa agagaaacaa actctcaaag
661 ctcagaggga tagagaagaa aaacaatttc aagaagaaga agaaaagcga cattgctgga
721 tgaaacaatt taaagttgaa aagaagaaat tagagaacat tcagaaggta ttttgctttt
781 gtttttcatg tatttttaaa atcagtagct acctctgaag aatattgata tttggattgt
841 gttgcagatt gagcttaata gtatgacttt taattactct ctgatagagg aagaaattga
901 ctgtgaatta acagtattta atatgaggtc cttgattagt ttttattgaa attcattgga
961 aggtcagaca cacttctgat cttgggggcc agtggagtct atgaatttca agggtcatca
1021 tggatagcct gaaatttaca atataaattg ttgtttttct ttatatgctt ctaaacattg
1081 gaaaaagcaa tgaaaaattc ttgagtatgc attaaccttg ctctgtggtc tggcatatga
1141 catgtaaaac atatttaaaa gtagttcaac catttagagt cagtctgcgc cccaccttca
1201 taattaagct acttccttga actggcaact ttttggtgtg aagttttgta ctgttttcat
1261 ttctgtcgta tgtgttgttg gtgttgtttt ccccctagga gatccacaca atcagatcat
1321 agtggtggta tatcggtatt gagaaactgg tggattttag gacaccactt gcaggtcatg
1381 agaaccttag aatatttgga taacaggcat gactgacttc tctatctttc atgattaaag
1441 ttgatttata cattatccag aacttgctgg gtttgagtgt tgcatataaa gaacattagc
1501 ttgttcaaca ttttttaatc ctccatgttg aggacatttc atttcttgac tgtgtagaaa
1561 ataaacacat taaaggctgg gcgcggtggc tcacgcctgt aatcccagca ccttgggagg
1621 ccgagacggg tgtataacga ggtcaggaga tcgagatcat cctggctaac acggtgaaac
1681 cccgtctcta ctaaaaatag agaaaattag ccaggcatag tggcgggcgc ctctagtccc
1741 agctacccgg gaggctgagg caggagaatg gcgtgaaccc gggaggcaga ccttgcagtg
1801 agccaagatc gtgccactgc actccagcct gggcgacaga gcaagactcc gtctcaaaaa
1861 aaaaaaaaaa aaaaaaaaaa aaaa
//