LOCUS       BC005397                1029 bp    mRNA    linear   HUM 15-JUL-2006
DEFINITION  Homo sapiens calpain, small subunit 2, mRNA (cDNA clone MGC:12536
            IMAGE:3685903), complete cds.
ACCESSION   BC005397
VERSION     BC005397.1
KEYWORDS    MGC.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 1029)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 1029)
  CONSRTM   NIH MGC Project
  TITLE     Direct Submission
  JOURNAL   Submitted (27-MAR-2001) National Institutes of Health, Mammalian
            Gene Collection (MGC), Bethesda, MD 20892-2590, USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: ATCC
            cDNA Library Preparation: CLONTECH Laboratories, Inc.
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: Sequencing Group at the Stanford Human Genome
            Center, Stanford University School of Medicine, Stanford, CA  94305
            Web site:       http://www-shgc.stanford.edu
            Contact:  (Dickson, Mark) mcd@paxil.stanford.edu
            Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
            R. M.
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAL Plate: 16 Row: g Column: 13
            This clone was selected for full length sequencing because it
            passed the following selection criteria: matched mRNA gi: 14161691.
FEATURES             Location/Qualifiers
     source          1..1029
                     /db_xref="H-InvDB:HIT000032439"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="MGC:12536 IMAGE:3685903"
                     /tissue_type="Bladder, carcinoma"
                     /clone_lib="NIH_MGC_53"
                     /lab_host="DH10B"
                     /note="Vector: pDNR-LIB"
     gene            1..1029
                     /gene="CAPNS2"
                     /gene_synonym="MGC12536"
                     /gene_synonym="MGC14804"
                     /db_xref="GeneID:84290"
                     /db_xref="HGNC:HGNC:16371"
     CDS             74..820
                     /gene="CAPNS2"
                     /gene_synonym="MGC12536"
                     /gene_synonym="MGC14804"
                     /codon_start=1
                     /product="calpain, small subunit 2"
                     /protein_id="AAH05397.1"
                     /db_xref="GeneID:84290"
                     /db_xref="HGNC:HGNC:16371"
                     /translation="MFLAKALLEGADRGLGEALGGLFGGGGQRREGGGRNIGGIVGGI
                     VNFISEAAAAQYTPEPPPTQQHFTSVEASESEEVRRFRQQFTQLAGPDMEVGATDLMN
                     ILNKVLSKHKDLKTDGFSLDTCRSIVSVMDSDTTGKLGFEEFKYLWNNIKKWQCVYKQ
                     YDRDHSGSLGSSQLRGALQAAGFQLNEQLYQMIVRRYANEDGDMDFNNFISCLVRLDA
                     MFRAFKSLDRDRDGLIQVSIKEWLQLTMYS"
BASE COUNT          298 a          207 c          253 g          271 t
ORIGIN      
        1 acttgaactc catttcatct tttttcatac catctctaag attgctgccg catttgcttg
       61 ttaaactgaa agcatgtttc ttgcaaaggc tctattggaa ggagcagatc gaggtcttgg
      121 agaagctctt ggaggcctct ttggaggagg tggtcagaga agagaaggag gaggaagaaa
      181 tattggaggg atagttggag gaattgtgaa ttttatcagt gaggctgcag cagctcagta
      241 tactccagaa ccgcctccca ctcagcagca tttcaccagt gtggaggcct cagaaagtga
      301 ggaagttagg cgatttcggc aacaatttac acagctggct ggaccagaca tggaggtggg
      361 tgccactgat ctgatgaata ttctcaacaa agtcctttct aagcacaaag atcttaagac
      421 tgacggtttt agtcttgaca cctgccggag cattgtgtct gtcatggaca gtgacacgac
      481 tggtaagctg ggctttgaag aatttaagta tctgtggaac aacatcaaga aatggcagtg
      541 tgtttataag cagtatgaca gggaccattc tgggtctctg ggaagttctc agctgcgggg
      601 agctctgcag gccgcaggct tccagctaaa tgaacaactt taccaaatga ttgtccgccg
      661 gtatgctaat gaagatggag atatggattt taacaatttc atcagctgct tggtccgcct
      721 ggatgccatg tttcgtgcct tcaagtctct ggatagagat agagatggcc tgattcaagt
      781 gtctatcaaa gaatggctgc agttgaccat gtattcctga agtgggaact gagaagtcaa
      841 gatcctccct ggaggacagg actgaaaacc ttgccaagct gtacacagtt gctgataccc
      901 tgtgcaacag ctctcatttc ctggcaagct ctttcacaac cctacatatt tctgatcatg
      961 tgctgccttt tactgctgaa ttaaaacaga tatttcacga aaaaaaaaaa aaaaaaaaaa
     1021 aaaaaaaaa
//