LOCUS BC005329 979 bp mRNA linear HUM 16-SEP-2003 DEFINITION Homo sapiens heat shock transcription factor 2, mRNA (cDNA clone IMAGE:3684733), complete cds. ACCESSION BC005329 VERSION BC005329.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 979) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 979) AUTHORS Strausberg,R. TITLE Direct Submission JOURNAL Submitted (27-MAR-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Cancer Genomics Office, National Cancer Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: CLONTECH Laboratories, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 16 Row: a Column: 11 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 6806888 This clone has the following problem: The cds is short compared to the longest cds in the locus. FEATURES Location/Qualifiers source 1..979 /db_xref="H-InvDB:HIT000032383" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:3684733" /tissue_type="Bladder, carcinoma" /clone_lib="NIH_MGC_53" /lab_host="DH10B" /note="Vector: pDNR-LIB" gene 1..979 /gene="HSF2" /db_xref="GeneID:3298" /db_xref="MIM:140581" CDS 82..774 /gene="HSF2" /codon_start=1 /product="HSF2 protein" /protein_id="AAH05329.1" /db_xref="GeneID:3298" /db_xref="MIM:140581" /translation="MKQSSNVPAFLSKLWTLVEETHTNEFITWSQNGQSFLVLDEQRF AKEILPKYFKHNNMASFVRQLNMYGFRKVVHIDSGIVKQERDGPVEFQHPYFKQGQDD LLENIKRKVSSSKPEENKIRQEDLTKIISSAQKVQIKQETIESRLSELKSENESLWKE VSELRAKHAQQQQVIRKIVQFIVTLVQNNQLVSLKRKRPLLLNTNGAQKKNLFQHIVK EPTDNHHHKVIF" misc_feature 103..681 /gene="HSF2" /note="HSF_DNA-bind; Region: HSF-type DNA-binding" /db_xref="CDD:pfam00447" BASE COUNT 346 a 174 c 193 g 266 t ORIGIN 1 gccgtagctg ccgccgtagc tgccgccgcc gctaccaccg cgttcgggtg tagaatttgg 61 aatccctgcg ccgcgttaac aatgaagcag agttcgaacg tgccggcttt cctcagcaag 121 ctgtggacgc ttgtggagga aacccacact aacgagttca tcacctggag ccagaatggc 181 caaagttttc tggtcttgga tgagcaacga tttgcaaaag aaattcttcc caaatatttc 241 aagcacaata atatggcaag ctttgtgagg caactgaata tgtatggttt ccgtaaagta 301 gtacatatcg actctggaat tgtaaagcaa gaaagagatg gtcctgtaga atttcagcat 361 ccttacttca aacaaggaca ggatgacttg ttggagaaca ttaaaaggaa ggtttcatct 421 tcaaaaccag aagaaaataa aattcgtcag gaagatttaa caaaaattat aagtagtgct 481 cagaaggttc agataaaaca ggaaactatt gagtccaggc tttctgaatt aaaaagtgag 541 aatgagtccc tttggaagga ggtgtcagaa ttacgagcaa agcatgcaca acagcaacaa 601 gttattcgaa agattgtcca gtttattgtt acattggttc aaaataacca acttgtgagt 661 ttaaaacgta aaaggcctct acttctaaac actaatggag cccaaaagaa gaacctgttt 721 cagcacatag tcaaagaacc aactgataat catcatcata aagtaatttt ttagttaggg 781 tctattttat atttattgtc tcagactaaa ttttattatg gcagtgtttc atgcattcaa 841 agaagtgtgg tgaataacaa ttcaagtgtt catcccacag ctttgttaaa ttgtgacatt 901 ttttattatt tgctttagat tattgtaaga aataaatcat cacaaatcca aaaaaaaaaa 961 aaaaaaaaaa aaaaaaaaa //