LOCUS BC005327 1681 bp mRNA linear HUM 18-MAR-2009
DEFINITION Homo sapiens nucleoporin like 2, mRNA (cDNA clone MGC:12413
IMAGE:3510844), complete cds.
ACCESSION BC005327
VERSION BC005327.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1681)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1681)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (27-MAR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 16 Row: a Column: 1
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 6679073
The stop codon of the CDS annotated on this record is located > 55
bases upstream of a splice junction, and therefore the mRNA is
predicted to be subject to nonsense-mediated mRNA decay (NMD).
FEATURES Location/Qualifiers
source 1..1681
/db_xref="H-InvDB:HIT000032381"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:12413 IMAGE:3510844"
/tissue_type="Bladder, carcinoma"
/clone_lib="NIH_MGC_53"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..1681
/gene="NUPL2"
/gene_synonym="CG1"
/gene_synonym="hCG1"
/gene_synonym="NLP-1"
/gene_synonym="NLP_1"
/db_xref="GeneID:11097"
/db_xref="HGNC:HGNC:17010"
CDS 63..737
/gene="NUPL2"
/gene_synonym="CG1"
/gene_synonym="hCG1"
/gene_synonym="NLP-1"
/gene_synonym="NLP_1"
/codon_start=1
/product="NUPL2 protein"
/protein_id="AAH05327.1"
/db_xref="GeneID:11097"
/db_xref="HGNC:HGNC:17010"
/translation="MAICQFFLQGRCRFGDRCWNEHPGARGAGGGRQQPQQQPSGNNR
RGWNTTSQRYSNVIQPSSFSKSTPWGGSRDQEKPYFSSFDSGASTNRKEGFGLSENPF
ASLSPDEQKDEKKLLEGIVKDMEVWESSGQWMFSVYSPVKKKPNISGFTDISPEELRL
EYHNFLTSNNLQSYLNSVQRLINQWRNRVNELKSLNISTKVALKCLWKIYTHLSPKIY
GPDCAL"
BASE COUNT 525 a 345 c 346 g 465 t
ORIGIN
1 gcccagtaac aggcatcgaa cggtgcagac tgaagacgcc ctccgtcagc gacgccgtcg
61 caatggccat ttgtcaattc ttccttcaag gccggtgccg ctttggagat cggtgctgga
121 acgaacatcc cggtgctagg ggtgcaggag gaggacggca gcaaccgcag cagcagcctt
181 caggtaataa tagacgtgga tggaatacaa ctagccagag atattccaat gtcatccagc
241 catccagttt ctccaaatcc acaccatggg ggggcagcag agatcaagaa aagccatatt
301 tcagttcttt tgattctgga gcttcaacta acaggaagga aggctttgga ttgtctgaga
361 acccatttgc ttcacttagt cctgatgagc agaaagatga aaagaaactt ctggaaggaa
421 ttgtaaaaga tatggaggtt tgggaatcat cagggcagtg gatgttttct gtttattcac
481 cagtgaaaaa gaaacctaat atttcaggtt ttacagacat ttcaccagag gaattgaggc
541 ttgaatacca taacttctta accagcaata acttacagag ttatctaaat tctgtccaac
601 gtttaataaa tcaatggagg aacagggtaa atgaactgaa aagtctaaat atatcaacta
661 aagtagcttt gaaatgcctt tggaagatat atacccacct gtctccaaag atctatggtc
721 ccgactgtgc tctctgatgt aaaggatgga gtaaatcaag cagcacctgc atttggattt
781 ggcagcagtc aagcagcaac atttatgtcg ccaggctttc cagtcaataa cagcagcagt
841 gataatgctc agaactttag ttttaaaaca aactctggat ttgctgctgc ctcttctgga
901 agccctgctg gttttgggag ttccccagca tttggagctg cagcctctac cagttcaggt
961 atctctactt ctgctccagc ttttggattt gggaagcctg aagtcacatc ggctgcatca
1021 ttttcattca aaagccctgc agcttccagt tttggatcac ctggattttc aggacttcca
1081 gcttccttgg caacaggtcc tgtcagagct ccagtggccc cagcctttgg aggtggcagt
1141 tctgtggctg gttttggtag tccgggctca cattctcaca ctgctttttc taagccatcc
1201 agtgacactt ttggaaatag cagcatatcc acttctctgt cagcctcaag cagcatcatt
1261 gcaacagata atgtgttatt cacacccaga aataaactaa cagtagaaga actggaacaa
1321 tttcaatcca agaaatttac tctgggaaaa attccattaa agcctccacc tctggaactt
1381 ctaaatgttt aaaagggcaa ttttaaatac aaaaaagaat gatgtttaaa attgctttga
1441 gtgattcata cagagatgta tatatgcata catgtatata ttcataagga atataagctt
1501 ccatcaatag tgattttaaa tttgattttt ttcttaactc taaatattta agtaaaaagt
1561 aacaaaaact ctgcaagcaa gggaattttt ttgtactgta attttgaatg gaactgaaaa
1621 attatgcacg aataaagtac ttttctcatg tcaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1681 a
//