LOCUS BC005322 1471 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens decorin, mRNA (cDNA clone MGC:12406 IMAGE:3934022),
complete cds.
ACCESSION BC005322
VERSION BC005322.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1471)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1471)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (27-MAR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: CLONTECH
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 16 Row: f Column: 17
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 47419921.
FEATURES Location/Qualifiers
source 1..1471
/db_xref="H-InvDB:HIT000032376"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:12406 IMAGE:3934022"
/tissue_type="Liver"
/clone_lib="NIH_MGC_76"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..1471
/gene="DCN"
/gene_synonym="CSCD"
/gene_synonym="DSPG2"
/gene_synonym="PG40"
/gene_synonym="PGII"
/gene_synonym="PGS2"
/gene_synonym="SLRR1B"
/db_xref="GeneID:1634"
/db_xref="HGNC:HGNC:2705"
/db_xref="MIM:125255"
CDS 42..1121
/gene="DCN"
/gene_synonym="CSCD"
/gene_synonym="DSPG2"
/gene_synonym="PG40"
/gene_synonym="PGII"
/gene_synonym="PGS2"
/gene_synonym="SLRR1B"
/codon_start=1
/product="decorin"
/protein_id="AAH05322.1"
/db_xref="GeneID:1634"
/db_xref="HGNC:HGNC:2705"
/db_xref="MIM:125255"
/translation="MKATIILLLLAQVSWAGPFQQRGLFDFMLEDEASGIGPEVPDDR
DFEPSLGPVCPFRCQCHLRVVQCSDLGLDKVPKDLPPDTTLLDLQNNKITEIKDGDFK
NLKNLHALILVNNKISKVSPGAFTPLVKLERLYLSKNQLKELPEKMPKTLQELRAHEN
EITKVRKVTFNGLNQMIVIELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITSIPQG
LPPSLTELHLDGNKISRVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHL
DNNKLTRVPGGLAEHKYIQVVYLHNNNISVVGSSDFCPPGHNTKKASYSGVSLFSNPV
QYWEIQPSTFRCVYVRSAIQLGNYK"
BASE COUNT 461 a 323 c 286 g 401 t
ORIGIN
1 attaaaaggt tccctggttg tgaaaataca tgagataaat catgaaggcc actatcatcc
61 tccttctgct tgcacaagtt tcctgggctg gaccgtttca acagagaggc ttatttgact
121 ttatgctaga agatgaggct tctgggatag gcccagaagt tcctgatgac cgcgacttcg
181 agccctccct aggcccagtg tgccccttcc gctgtcaatg ccatcttcga gtggtccagt
241 gttctgattt gggtctggac aaagtgccaa aggatcttcc ccctgacaca actctgctag
301 acctgcaaaa caacaaaata accgaaatca aagatggaga ctttaagaac ctgaagaacc
361 ttcacgcatt gattcttgtc aacaataaaa ttagcaaagt tagtcctgga gcatttacac
421 ctttggtgaa gttggaacga ctttatctgt ccaagaatca gctgaaggaa ttgccagaaa
481 aaatgcccaa aactcttcag gagctgcgtg cccatgagaa tgagatcacc aaagtgcgaa
541 aagttacttt caatggactg aaccagatga ttgtcataga actgggcacc aatccgctga
601 agagctcagg aattgaaaat ggggctttcc agggaatgaa gaagctctcc tacatccgca
661 ttgctgatac caatatcacc agcattcctc aaggtcttcc tccttccctt acggaattac
721 atcttgatgg caacaaaatc agcagagttg atgcagctag cctgaaagga ctgaataatt
781 tggctaagtt gggattgagt ttcaacagca tctctgctgt tgacaatggc tctctggcca
841 acacgcctca tctgagggag cttcacttgg acaacaacaa gcttaccaga gtacctggtg
901 ggctggcaga gcataagtac atccaggttg tctaccttca taacaacaat atctctgtag
961 ttggatcaag tgacttctgc ccacctggac acaacaccaa aaaggcttct tattcgggtg
1021 tgagtctttt cagcaacccg gtccagtact gggagataca gccatccacc ttcagatgtg
1081 tctacgtgcg ctctgccatt caactcggaa actataagta attctcaaga aagccctcat
1141 ttttataacc tggcaaaatc ttgttaatgt cattgctaaa aaataaataa aagctagata
1201 ctggaaacct aactgcaatg tggatgtttt acccacatga cttattatgc ataaagccaa
1261 atttccagtt taagtaattg cctacaataa aaagaaattt tgcctgccat tttcagaatc
1321 atcttttgaa gctttctgtt gatgttaact gagctactag agatattctt atttcactaa
1381 atgtaaaatt tggagtaaat atatatgtca atatttagta aagcttttct tttttaattt
1441 ccaaaaaaaa aaaaaaaaaa aaaaaaaaaa a
//