LOCUS       BC005312                1201 bp    mRNA    linear   HUM 15-JUL-2006
DEFINITION  Homo sapiens major histocompatibility complex, class II, DR beta 4,
            mRNA (cDNA clone MGC:12387 IMAGE:3933019), complete cds.
ACCESSION   BC005312
VERSION     BC005312.1
KEYWORDS    MGC.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 1201)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 1201)
  CONSRTM   NIH MGC Project
  TITLE     Direct Submission
  JOURNAL   Submitted (27-MAR-2001) National Institutes of Health, Mammalian
            Gene Collection (MGC), Bethesda, MD 20892-2590, USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: CLONTECH
            cDNA Library Preparation: CLONTECH Laboratories, Inc.
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: Sequencing Group at the Stanford Human Genome
            Center, Stanford University School of Medicine, Stanford, CA  94305
            Web site:       http://www-shgc.stanford.edu
            Contact:  (Dickson, Mark) mcd@paxil.stanford.edu
            Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
            R. M.
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAL Plate: 16 Row: d Column: 15
            This clone was selected for full length sequencing because it
            passed the following selection criteria: matched mRNA gi: 52630343.
FEATURES             Location/Qualifiers
     source          1..1201
                     /db_xref="H-InvDB:HIT000032366_03"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="MGC:12387 IMAGE:3933019"
                     /tissue_type="Brain"
                     /clone_lib="NIH_MGC_73"
                     /lab_host="DH10B"
                     /note="Vector: pDNR-LIB"
     gene            1..1201
                     /gene="HLA-DRB4"
                     /gene_synonym="DRB4"
                     /gene_synonym="HLA DRB1"
                     /db_xref="GeneID:3126"
                     /db_xref="HGNC:HGNC:4952"
     CDS             64..864
                     /gene="HLA-DRB4"
                     /gene_synonym="DRB4"
                     /gene_synonym="HLA DRB1"
                     /codon_start=1
                     /product="major histocompatibility complex, class II, DR
                     beta 4"
                     /protein_id="AAH05312.1"
                     /db_xref="GeneID:3126"
                     /db_xref="HGNC:HGNC:4952"
                     /translation="MVCLKLPGGSCMAALTVTLTVLSSPLALAGDTQPRFLEQAKCEC
                     HFLNGTERVWNLIRYIYNQEEYARYNSDLGEYQAVTELGRPDAEYWNSQKDLLERRRA
                     EVDTYCRYNYGVVESFTVQRRVQPKVTVYPSKTQPLQHHNLLVCSVNGFYPGSIEVRW
                     FRNGQEEKAGVVSTGLIQNGDWTFQTLVMLETVPRSGEVYTCQVEHPSMMSPLTVQWS
                     ARSESAQSKMLSGVGGFVLGLLFLGTGLFIYFRNQKGHSGLQPTGLLS"
BASE COUNT          284 a          310 c          323 g          284 t
ORIGIN      
        1 atagttctcc ctgattgaga cttgcctgct gctgtgacca ctggtcttgt cctcttctcc
       61 agcatggtgt gtctgaagct ccctggaggc tcctgtatgg cagcgctgac agtgacattg
      121 acggtgctga gctccccact ggctttggct ggggacaccc aaccacgttt cttggagcag
      181 gctaagtgtg agtgtcattt cctcaatggg acggagcgag tgtggaacct gatcagatac
      241 atctataacc aagaggagta cgcgcgctac aacagtgacc tgggggagta ccaggcggtg
      301 acggagctgg ggcggcctga cgctgagtac tggaacagcc agaaggacct cctggagcgg
      361 aggcgggccg aggtggacac ctactgcaga tacaactacg gggttgtgga gagcttcaca
      421 gtgcagcggc gagtccaacc taaggtgact gtgtatcctt caaagaccca gcccctgcag
      481 caccacaacc tcctggtctg ctctgtgaat ggtttctatc caggcagcat tgaagtcagg
      541 tggttccgga acggccagga agagaaggct ggggtggtgt ccacaggcct gatccagaat
      601 ggagactgga ccttccagac cctggtgatg ctggaaacag ttcctcggag tggagaggtt
      661 tacacctgcc aagtggagca tccaagcatg atgagccctc tcacggtgca atggagtgca
      721 cggtctgaat ctgcacagag caagatgctg agtggagtcg ggggctttgt gctgggcctg
      781 ctcttccttg ggacagggct gttcatctac ttcaggaatc agaaaggaca ctctggactt
      841 cagccaacag gactcttgag ctgaagtgca gatgaccaca ttcaaggaag aaccttctgc
      901 cccagctttg caagatgaaa agctttccca cttggctctt attcttccac aagagctttg
      961 tcaggaccag gttgttactg gttcagcaac tctgcagaaa atgtcctccc ttgtggcttc
     1021 cttagctcct gttcttggcc tgaagcctca cagctttgat ggcagtgcct catcttcaac
     1081 ttttgtgctt ccctttacct aaactgtcct gcctcccgtg catctgtact ccccttgtgc
     1141 cacacattgc attattaaat gtttctcaaa caaaaaaaaa aaaaaaaaaa aaaaaaaaaa
     1201 a
//