LOCUS BC005288 1052 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens TGF beta-inducible nuclear protein 1, mRNA (cDNA clone
MGC:12345 IMAGE:3683720), complete cds.
ACCESSION BC005288
VERSION BC005288.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1052)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1052)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (27-MAR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 16 Row: c Column: 9
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 21359901.
FEATURES Location/Qualifiers
source 1..1052
/db_xref="H-InvDB:HIT000032348"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:12345 IMAGE:3683720"
/tissue_type="Bladder, carcinoma"
/clone_lib="NIH_MGC_53"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..1052
/gene="TINP1"
/gene_synonym="CDK105"
/gene_synonym="HCL-G1"
/gene_synonym="YR-29"
/db_xref="GeneID:10412"
CDS 114..896
/gene="TINP1"
/gene_synonym="CDK105"
/gene_synonym="HCL-G1"
/gene_synonym="YR-29"
/codon_start=1
/product="TGF beta-inducible nuclear protein 1"
/protein_id="AAH05288.1"
/db_xref="GeneID:10412"
/translation="MPQNEYIELHRKRYGYRLDYHEKKRKKESREAHERSKKAKKMIG
LKAKLYHKQRHAEKIQMKKTIKMHEKRNTKQKNDEKTPQGAVPAYLLDREGQSRAKVL
SNMIKQKRKEKAGKWEVPLPKVRAQGETEVLKVIRTGKRKKKAWKRMVTKVCFVGDGF
TRKPPKYERFIRPMGLRFKKAHVTHPELKATFCLPILGVKKNPSSPLYTTLGVITKGT
VIEVNVSELGLVTQGGKVIWGKYAQVTNNPENDGCINAVLLV"
BASE COUNT 388 a 192 c 235 g 237 t
ORIGIN
1 gactctttcc tgtcccggcc tgcgtggtgt gggcttgtgg gtctttgaga cccgaaaatt
61 gagagcgttt tcgcactcca gcggctgctc ctggcggctc tgcggccgtc accatgccac
121 agaatgaata tattgaatta caccgtaaac gctatggata ccgtttggat taccatgaga
181 aaaagagaaa gaaggaaagt cgagaggctc atgaacgttc aaagaaggca aagaaaatga
241 ttggtctgaa ggctaagctt taccataaac agcgtcatgc tgagaaaata caaatgaaaa
301 agactatcaa gatgcatgaa aagagaaaca ccaaacaaaa gaatgatgaa aagacaccac
361 agggagcagt acctgcctat ctgctggaca gagagggaca atctcgagct aaagtacttt
421 ccaatatgat taaacagaaa agaaaagaga aggcgggaaa atgggaagtc cctctgccta
481 aagtacgtgc ccagggagaa acagaagtat taaaagttat tcgaacagga aagagaaaga
541 agaaggcatg gaagagaatg gttactaaag tgtgctttgt tggagatggc tttacaagaa
601 aaccacctaa atatgaaaga ttcatcaggc caatgggctt gcgtttcaag aaagcccatg
661 taacacatcc tgaactgaaa gccacctttt gcctaccaat acttggtgta aagaagaatc
721 cctcatcccc actgtataca actttgggtg ttattaccaa aggtactgtc attgaagtaa
781 atgtgagcga attgggcctt gtgacacaag gaggcaaagt tatttgggga aaatatgccc
841 aggttaccaa caatcctgaa aatgatggat gtataaatgc agtcttactg gtttgacagc
901 aatttcatat ataattattg aggactacac accaattgaa gaaactgcca ttactgtgat
961 gtttctgaat actaccaaac agccatacat gtctgcaatg aagagattta ttaaattgta
1021 aacaaaaaaa aaaaaaaaaa aaaaaaaaaa aa
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