LOCUS BC005271 1079 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5,
16kDa, mRNA (cDNA clone MGC:12314 IMAGE:3997377), complete cds.
ACCESSION BC005271
VERSION BC005271.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1079)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1079)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (27-MAR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 16 Row: l Column: 8
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 33519467.
FEATURES Location/Qualifiers
source 1..1079
/db_xref="H-InvDB:HIT000032338"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:12314 IMAGE:3997377"
/tissue_type="Bladder, carcinoma"
/clone_lib="NIH_MGC_53"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..1079
/gene="NDUFB5"
/gene_synonym="CI-SGDH"
/gene_synonym="FLJ30597"
/gene_synonym="MGC12314"
/gene_synonym="SGDH"
/db_xref="GeneID:4711"
/db_xref="HGNC:HGNC:7700"
/db_xref="MIM:603841"
CDS 21..590
/gene="NDUFB5"
/gene_synonym="CI-SGDH"
/gene_synonym="FLJ30597"
/gene_synonym="MGC12314"
/gene_synonym="SGDH"
/codon_start=1
/product="NADH dehydrogenase (ubiquinone) 1 beta
subcomplex, 5, 16kDa"
/protein_id="AAH05271.1"
/db_xref="GeneID:4711"
/db_xref="HGNC:HGNC:7700"
/db_xref="MIM:603841"
/translation="MAAMSLLRRVSVTAVAALSGRPLGTRLGFGGFLTRGFPKAAAPV
RHSGDHGKRLFVIRPSRFYDRRFLKLLRFYIALTGIPVAIFITLVNVFIGQAELAEIP
EGYVPEHWEYYKHPISRWIARNFYDSPEKIYERTMAVLQIEAEKAELRVKELEVRKLM
HVRGDGPWYYYETIDKELIDHSPKATPDN"
BASE COUNT 340 a 189 c 226 g 324 t
ORIGIN
1 tcctcctgcc cgtagtagcc atggcggcca tgagtttgtt gcggcgggtt tcggttactg
61 cggtggcagc tctgtctggc cggccccttg gcactcgcct cggatttggg ggcttcctca
121 ctcgtggctt tccgaaggct gctgctcctg ttcgacacag tggagaccat gggaaaagac
181 tatttgtcat cagaccttct agattctatg acaggcgttt tttgaagtta ttgagattct
241 acattgcatt gactgggatt ccagtagcaa ttttcataac tctggtgaat gtattcattg
301 gtcaagctga actagcagaa attccagaag gctatgtccc agaacactgg gaatattata
361 agcatcccat atcaagatgg attgcccgta atttctatga tagtcctgaa aagatatatg
421 aaagaacaat ggccgtcctt cagattgaag ctgaaaaggc tgaattacgg gtaaaggagc
481 tggaagtgcg aaaattgatg catgtgagag gagatggacc ctggtattac tatgagacaa
541 ttgacaagga acttattgat cattctccga aagcaactcc tgacaattag gcattttttt
601 ctccaaatac aaagtatatt ctctttattg gaaaataaat taataaatat attctgtatt
661 tttgctctcc gtgaaaaaca aaagagcctc tgacattact gtctctcagt gttggttcag
721 attgaggctt ttgtttgagg agtttggctt ccagtcccca aagaaggttt aaaatgtact
781 aataaaaact ggagaaatag gaatttgtga actcctaaaa ttgtagcaac tttgaaaggt
841 tagtgtttta tttacctgac aaatggaagt tatagaagtc taataatgtt aagcaccagt
901 aattatagta ttttgtacaa atgcctgtac tgtagatgtc tgtattattg aggggcaact
961 caggatttta agttccataa agtattgaac caactctaaa atgttaactc cttaataaac
1021 agattctcag taaacaaatt ttaaagtcta aaaaaaaaaa aaaaaaaaaa aaaaaaaaa
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