LOCUS BC005239 1726 bp mRNA linear HUM 11-SEP-2007
DEFINITION Homo sapiens NDC80 homolog, kinetochore complex component (S.
cerevisiae), mRNA (cDNA clone IMAGE:3997364), partial cds.
ACCESSION BC005239
VERSION BC005239.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1726)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1726)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (27-MAR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 16 Row: d Column: 8
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 5174456.
FEATURES Location/Qualifiers
source 1..1726
/db_xref="H-InvDB:HIT000086495"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3997364"
/tissue_type="Bladder, carcinoma"
/clone_lib="NIH_MGC_53"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..>1726
/gene="NDC80"
/gene_synonym="HEC"
/gene_synonym="HEC1"
/gene_synonym="hsNDC80"
/gene_synonym="TID3"
/db_xref="GeneID:10403"
/db_xref="HGNC:HGNC:16909"
/db_xref="MIM:607272"
CDS 153..>1726
/gene="NDC80"
/gene_synonym="HEC"
/gene_synonym="HEC1"
/gene_synonym="hsNDC80"
/gene_synonym="TID3"
/codon_start=1
/product="NDC80 protein"
/protein_id="AAH05239.1"
/db_xref="GeneID:10403"
/db_xref="HGNC:HGNC:16909"
/db_xref="MIM:607272"
/translation="MKRSSVSSGGAGRLSMQELRSQDVNKQGLYTPQTKEKPTFGKLS
INKPTSERKVSLFGKRTSGHGSRNSQLGIFSSSEKIKDPRPLNDKAFIQQCIRQLCEF
LTENGYAHNVSMKSLQAPSVKDFLKIFTFLYGFLCPSYELPDTKFEEEVPRIFKDLGY
PFALSKSSMYTVGAPHTWPHIVAALVWLIDCIKIHTAMKESSPLFDDGQPWGEETEDG
IMHNKLFLDYTIKCYESFMSGADSFDEMNAELQSKLKDLFNVDAFKLESLEAKNRALN
EQIARLEQEREKEPNRLESLRKLKASLQGDVQKYQAYMSNLESHSAILDQKLNGLNEE
IARVELECETIKQENTRLQNIIDNQKYSVADIERINHERNELQQTINKLTKDLEAEQQ
KLWNEELKYARGKEAIETQLAEYHKLARKLKLIPKGAENSKGYDFEIKFNPEAGANCL
VKYRAQVYVPLKELLNETEEEINKALNKKMGLEDTLEQLNAMITESKRSVRTLKEEVQ
KLDDLYQQKKKKKKKK"
BASE COUNT 618 a 311 c 376 g 421 t
ORIGIN
1 gccggcggag aatttcaaat tcgaacggct ttggcgggcc gaggaaggac ctggtgtttt
61 gatgaccgct gtcctgtcta gcagatactt gcacggttta cagaaattcg gtccctgggt
121 cgtgtcagga aactggaaaa aaggtcataa gcatgaagcg cagttcagtt tccagcggtg
181 gtgctggccg cctctccatg caggagttaa gatcccagga tgtaaataaa caaggcctct
241 atacccctca aaccaaagag aaaccaacct ttggaaagtt gagtataaac aaaccgacat
301 ctgaaagaaa agtctcgcta tttggcaaaa gaactagtgg acatggatcc cggaatagtc
361 aacttggtat attttccagt tctgagaaaa tcaaggaccc gagaccactt aatgacaaag
421 cattcattca gcagtgtatt cgacaactct gtgagtttct tacagaaaat ggttatgcac
481 ataatgtgtc catgaaatct ctacaagctc cctctgttaa agacttcctg aagatcttca
541 catttcttta tggcttcctg tgcccctcat acgaacttcc tgacacaaag tttgaagaag
601 aggtcccaag aatctttaaa gaccttgggt atccttttgc actatccaaa agctccatgt
661 acacagtggg ggctcctcat acatggcctc acattgtggc agccttagtt tggctaatag
721 actgcatcaa gatacatact gccatgaaag aaagctcacc tttatttgat gatgggcagc
781 cttggggaga agaaactgaa gatggaatta tgcataataa gttgtttttg gactacacca
841 taaaatgcta tgagagtttt atgagtggtg ccgacagctt tgatgagatg aatgcagagc
901 tgcagtcaaa actgaaggat ttatttaatg tggatgcttt taagctggaa tcattagaag
961 caaaaaacag agcattgaat gaacagattg caagattgga acaagaaaga gaaaaagaac
1021 cgaatcgtct agagtcgttg agaaaactga aggcttcctt acaaggagat gttcaaaagt
1081 atcaggcata catgagcaat ttggagtctc attcagccat tcttgaccag aaattaaatg
1141 gtctcaatga ggaaattgct agagtagaac tagaatgtga aacaataaaa caggagaaca
1201 ctcgactaca gaatatcatt gacaaccaga agtactcagt tgcagacatt gagcgaataa
1261 atcatgaaag aaatgaattg cagcagacta ttaataaatt aaccaaggac ctggaagctg
1321 aacaacagaa gttgtggaat gaggagttaa aatatgccag aggcaaagaa gcgattgaaa
1381 cacaattagc agagtatcac aaattggcta gaaaattaaa acttattcct aaaggtgctg
1441 agaattccaa aggttatgac tttgaaatta agtttaatcc cgaggctggt gccaactgcc
1501 ttgtcaaata cagggctcaa gtttatgtac ctcttaagga actcctgaat gaaactgaag
1561 aagaaattaa taaagcccta aataaaaaaa tgggtttgga ggatacttta gaacaattga
1621 atgcaatgat aacagaaagc aagagaagtg tgagaactct gaaagaagaa gttcaaaagc
1681 tggatgatct ttaccaacaa aaaaaaaaaa aaaaaaaaaa aaaaaa
//