LOCUS BC005225 1124 bp mRNA linear HUM 11-SEP-2007
DEFINITION Homo sapiens KRR1, small subunit (SSU) processome component,
homolog (yeast), mRNA (cDNA clone IMAGE:3685682), partial cds.
ACCESSION BC005225
VERSION BC005225.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1124)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1124)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (27-MAR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 16 Row: o Column: 11
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 37059784.
FEATURES Location/Qualifiers
source 1..1124
/db_xref="H-InvDB:HIT000086490"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3685682"
/tissue_type="Bladder, carcinoma"
/clone_lib="NIH_MGC_53"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..>1124
/gene="KRR1"
/gene_synonym="RIP-1"
/db_xref="GeneID:11103"
/db_xref="HGNC:HGNC:5176"
CDS 37..>1124
/gene="KRR1"
/gene_synonym="RIP-1"
/codon_start=1
/product="KRR1 protein"
/protein_id="AAH05225.1"
/db_xref="GeneID:11103"
/db_xref="HGNC:HGNC:5176"
/translation="MASPSLERPEKGAGKSEFRNQKPKPENQDESELLTVPDGWKEPA
FSKEDNPRGLLEESSFATLFPKYREAYLKECWPLVQKALNEHHVNATLDLIEGSMTVC
TTKKTFDPYIIIRARDLIKLLARSVSFEQAVRILQDDVACDIIKIGSLVRNKERFVKR
RQRLIGPKGSTLKALELLTNCYIMVQGNTVSAIGPFSGLKEVRKVVLDTMKNIHPIYN
IKSLMIKRELAKDSELRSQSWERFLPQFKHKNVNKRKEPKKKTVKKEYTPFPPPQPES
QIDKELASGEYFLKANQKKRQKMEAIKAKQAEAISKRQEERNKAFIPPKEKPIVKPKE
ASTETKIDVASIKEKVKKGKKKKKKKKK"
BASE COUNT 431 a 191 c 246 g 256 t
ORIGIN
1 agtttcattt ccggagccac cggaagcagc ttgcaaatgg cgtctccctc gctggagcgg
61 ccagaaaaag gcgctggaaa aagtgaattt cgtaaccaga agccgaagcc ggagaaccaa
121 gatgaatcag aactccttac ggttcctgat ggttggaagg aaccagcttt ttccaaagag
181 gacaatccca gaggactttt ggaggagagc agtttcgcaa ctttgttccc aaaatacagg
241 gaagcttact tgaaagagtg ttggccattg gtgcagaaag ccttaaatga acatcatgtt
301 aatgcaaccc tggacctgat cgaaggcagc atgactgttt gtactacaaa gaagactttt
361 gatccatata tcatcattag ggccagagat ctgataaaac tgttagcaag gagtgtttca
421 tttgaacagg cagtacgaat tcttcaggat gatgttgcat gtgacatcat taaaataggt
481 tctttagtaa ggaataaaga gagatttgta aaacgaagac aacggcttat tggtcccaaa
541 ggatctacat tgaaggcatt ggaactctta actaattgtt acattatggt tcagggaaac
601 acagtttcag ccattggacc ttttagtggc ttaaaagagg ttagaaaagt agtccttgat
661 actatgaaga atattcatcc aatttataac attaaaagct taatgattaa gagagagttg
721 gcaaaagatt ctgaattacg atcacaaagt tgggagagat ttttgccaca gttcaaacac
781 aaaaatgtga ataaacgcaa ggaaccaaag aaaaaaactg ttaagaaaga atatacgcca
841 ttcccaccac cacaaccaga aagtcagatc gataaagaat tggctagtgg tgaatacttt
901 ttgaaggcaa atcagaagaa gcggcagaaa atggaagcaa taaaggctaa acaagcagaa
961 gccatcagta agagacaaga ggaaagaaac aaagcattta ttccacctaa ggaaaaacca
1021 attgtgaaac ctaaggaagc ttctactgaa actaaaattg atgtggccag catcaaggaa
1081 aaggttaaga aaggaaaaaa aaaaaaaaaa aaaaaaaaaa aaaa
//