LOCUS BC005201 1193 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens transmembrane protein 138, mRNA (cDNA clone MGC:12208
IMAGE:3684390), complete cds.
ACCESSION BC005201
VERSION BC005201.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1193)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1193)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (27-MAR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 16 Row: i Column: 9
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 24475981.
FEATURES Location/Qualifiers
source 1..1193
/db_xref="H-InvDB:HIT000032286"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:12208 IMAGE:3684390"
/tissue_type="Bladder, carcinoma"
/clone_lib="NIH_MGC_53"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..1193
/gene="TMEM138"
/gene_synonym="HSPC196"
/db_xref="GeneID:51524"
/db_xref="HGNC:HGNC:26944"
CDS 175..663
/gene="TMEM138"
/gene_synonym="HSPC196"
/codon_start=1
/product="transmembrane protein 138"
/protein_id="AAH05201.1"
/db_xref="GeneID:51524"
/db_xref="HGNC:HGNC:26944"
/translation="MLQTSNYSLVLSLQFLLLSYDLFVNSFSELLQKTPVIQLVLFII
QDIAVLFNIIIIFLMFFNTFVFQAGLVNLLFHKFKGTIILTAVYFALSISLHVWVMNL
RWKNSNSFIWTDGLQMLFVFQRLAAVLYCYFYKRTAVRLGDPHFYQDSLWLRKEFMQV
RR"
BASE COUNT 301 a 317 c 248 g 327 t
ORIGIN
1 gatgtccgca tgacaaccga cgttggagtt tggaggtgct tgccttagag caagggaaac
61 agctctcatt caaaggaact agaagcctct ccctcagtgg cagggagaca gccaggagcg
121 gttttctggg aactgtggga tgtgcccttg ggggcccgag aaaacagaag gaagatgctc
181 cagaccagta actacagcct ggtgctctct ctgcagttcc tgctgctgtc ctatgacctc
241 tttgtcaatt ccttctcaga actgctccaa aagactcctg tcatccagct tgtgctcttc
301 atcatccagg atattgcagt cctcttcaac atcatcatca ttttcctcat gttcttcaac
361 accttcgtct tccaggctgg cctggtcaac ctcctattcc ataagttcaa agggaccatc
421 atcctgacag ctgtgtactt tgccctcagc atctcccttc atgtctgggt catgaactta
481 cgctggaaaa actccaacag cttcatatgg acagatggac ttcaaatgct gtttgtattc
541 cagagactag cagcagtgtt gtactgctac ttctataaac ggacagccgt aagactaggc
601 gatcctcact tctaccagga ctctttgtgg ctgcgcaagg agttcatgca agttcgaagg
661 tgacctcttg tcacactgat ggatactttt ccttcctgat agaagccaca tttgctgctt
721 tgcagggaga gttggcccta tgcatgggca aacagctgga ctttccaagg aaggttcaga
781 ctagctgtgt tcagcattca agaaggaaga tcctccctct tgcacaatta gagtgtcccc
841 atcggtctcc agtgcggcat cccttccttg ccttctacct ctgttccacc ccctttcctt
901 cctttcctct ctgtaccatt cattctccct gaccggcctt tcttgccgag ggttctgtgg
961 ctcttaccct tgtgaagctt ttcctttagc ctgggacaga aggacctccc agcccccaaa
1021 ggatctccca gtgaccaaag gatgcgaaga gtgatagtta cgtgctcctg actgatcaca
1081 ccgcagacat ttagattttt atacccaagg cactttaaaa aaatgtttta taaatagaga
1141 ataaattgaa ttcttgttcc taaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaa
//