LOCUS BC005187 1141 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens ubiquitin-fold modifier conjugating enzyme 1, mRNA
(cDNA clone MGC:12182 IMAGE:3961569), complete cds.
ACCESSION BC005187
VERSION BC005187.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1141)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1141)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (27-MAR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 16 Row: e Column: 20
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 7705480.
FEATURES Location/Qualifiers
source 1..1141
/db_xref="H-InvDB:HIT000032275"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:12182 IMAGE:3961569"
/tissue_type="Bladder, carcinoma"
/clone_lib="NIH_MGC_53"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..1141
/gene="UFC1"
/gene_synonym="HSPC155"
/db_xref="GeneID:51506"
/db_xref="HGNC:HGNC:26941"
CDS 247..750
/gene="UFC1"
/gene_synonym="HSPC155"
/codon_start=1
/product="ubiquitin-fold modifier conjugating enzyme 1"
/protein_id="AAH05187.1"
/db_xref="GeneID:51506"
/db_xref="HGNC:HGNC:26941"
/translation="MADEATRRVVSEIPVLKTNAGPRDRELWVQRLKEEYQSLIRYVE
NNKNADNDWFRLESNKEGTRWFGKCWYIHDLLKYEFDIEFDIPITCPTTAPEIAVPEL
DGKTAKMYRGGKICLTDHFKPLWARNVPKFGLAHLMALGLGPWLAVEIPDLIQKGVIQ
HKEKCNQ"
BASE COUNT 336 a 254 c 280 g 271 t
ORIGIN
1 accctttgtg ccttatgcgg tgattttaat gataggtgtc atatatagga cggagtaatc
61 tgtttacatt ctgttcttct cgatgcactc acaagcgggt aactaggtga caagaaaaca
121 gagatcttat tcaaaagagg tcttacagca acccaacgtc tcatcttccc atagtaaaga
181 tgacggcgcc ttgaggtaag ctacaggcaa caccacttcc gcgtttctct tgcgccctgg
241 tccaagatgg cggatgaagc cacgcgacgt gttgtgtctg agatcccggt gctgaagact
301 aacgccggac cccgagatcg tgagttgtgg gtgcagcgac tgaaggagga atatcagtcc
361 cttatccggt atgtggagaa caacaagaat gctgacaacg attggttccg actggagtcc
421 aacaaggaag gaactcggtg gtttggaaaa tgctggtata tccatgacct cctgaaatat
481 gagtttgaca tcgagtttga cattcctatc acatgtccta ctactgcccc agaaattgca
541 gttcctgagc tggatggaaa gacagcaaag atgtacaggg gtggcaaaat atgcctgacg
601 gatcatttca aacctttgtg ggccaggaat gtgcccaaat ttggactagc tcatctcatg
661 gctctggggc tgggtccatg gctggcagtg gaaatccctg atctgattca gaagggcgtc
721 atccaacaca aagagaaatg caaccaatga agaatcaagc cactgaggca gggcagaggg
781 acctttgata ggctacgata ctattttcct gtgcatcaca cttaactcat ctaactgctt
841 ccccggacac cctccacctc tagttgttac taagtagctg cagtaggcat tgctggggaa
901 gaaacaaaca cacaccaaac agtactgcta cttagtttct aaggctgcac agggaaggga
961 aagactgggc tttggacaat ctagaggtaa tttatatccg cccccaggtg gagcaacatg
1021 cgattctgga ggcacggggg taactgaaag tgagtacata tagtctttct ggtttctgga
1081 gataacccat caataaagct gcttcctctg gaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1141 a
//