LOCUS BC005174 1380 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens activating transcription factor 5, mRNA (cDNA clone MGC:842 IMAGE:3504701), complete cds. ACCESSION BC005174 VERSION BC005174.2 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1380) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1380) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (26-MAR-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Aug 19, 2003 this sequence version replaced BC005174.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Institute for Systems Biology http://www.systemsbiology.org contact: amadan@systemsbiology.org Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 7 Row: k Column: 21 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 12597624. FEATURES Location/Qualifiers source 1..1380 /db_xref="H-InvDB:HIT000032264" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:842 IMAGE:3504701" /tissue_type="Placenta, choriocarcinoma" /clone_lib="NIH_MGC_21" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..1380 /gene="ATF5" /gene_synonym="ATFX" /gene_synonym="HMFN0395" /db_xref="GeneID:22809" /db_xref="HGNC:HGNC:790" /db_xref="MIM:606398" CDS 307..1155 /gene="ATF5" /gene_synonym="ATFX" /gene_synonym="HMFN0395" /codon_start=1 /product="activating transcription factor 5" /protein_id="AAH05174.1" /db_xref="GeneID:22809" /db_xref="HGNC:HGNC:790" /db_xref="MIM:606398" /translation="MSLLATLGLELDRALLPASGLGWLVDYGKLPPAPAPLAPYEVLG GALEGGLPVGGEPLAGDGFSDWMTERVDFTALLPLEPPLPPGTLPQPSPTPPDLEAMA SLLKKELEQMEDFFLDAPLLPPPSPPPLPPPPLPPAPSLPLSLPSFDLPQPPVLDTLD LLAIYCRNEAGQEEVGMPPLPPPQQPPPPSPPQPSRLAPYPHPATTRGDRKQKKRDQN KSAALRYRQRKRAEGEALEGECQGLEARNRELKERAESVEREIQYVKDLLIEVYKARS QRTRSC" BASE COUNT 242 a 511 c 364 g 263 t ORIGIN 1 cctcggatca cagtctcttc tcactacagt gtcgccgcct ctgcctgcgt agccccggcc 61 atggctctgt agcctcgacc cctttgtgcc cccggcccgt ctccgcgctc accacgcctg 121 cgctctccgc tcccaccttc tttcttcagc cgaggccgcc gccgcctctc cttgctgcag 181 ccatggagtc ttccactttc gccttggtgc ctgtcttcgc ccacctgagc atcctccaga 241 gcctcgtgcc agctgctggt gcagcctctc ctgttgccat cagtgcccag cacctgtgct 301 acagccatgt cactcctggc gaccctgggg ctggagctgg acagggccct gctcccagct 361 agtgggctgg gatggctcgt agactatggg aaactccccc cggcccctgc ccccctggct 421 ccctatgagg tccttggggg agccctggag ggcgggcttc cagtgggggg agagcccctg 481 gcaggtgatg gcttctctga ctggatgact gagcgagttg atttcacagc tctcctccct 541 ctggagcctc ccctaccccc cggcaccctc ccccaacctt ccccaacccc acctgacctg 601 gaagctatgg cctccctcct caagaaggag ctggaacaga tggaagactt cttcctagat 661 gccccgctcc tcccaccacc ctccccgccg ccactaccac caccaccact accaccagcc 721 ccctccctcc ccctgtccct cccctccttt gacctccccc agccccctgt cttggatact 781 ctggacttgc tggccatcta ctgccgcaac gaggccgggc aggaggaagt ggggatgccg 841 cctctgcccc cgccacagca gccccctcct ccttctccac ctcaaccttc tcgcctggcc 901 ccctacccac atcctgccac cacccgaggg gaccgcaagc aaaagaagag agaccagaac 961 aagtcggcgg ctctgaggta ccgccagcgg aagcgggcag agggtgaggc cctggagggc 1021 gagtgccagg ggctggaggc acggaatcgc gagctgaagg aacgggcaga gtccgtggag 1081 cgcgagatcc agtacgtcaa ggacctgctc atcgaggttt acaaggcccg gagccagagg 1141 acccgtagct gctagaaggg caggggtgtg gcttctgggg gctggtcttc agctctggcg 1201 ccttcatccc cctgcctcta ccttcattcc aaacccctct cggccgggtg cagtggctta 1261 tgcttgtaat cccagcactt tgggaggcca aggcaggagg atcgtttgag gccaggaggt 1321 caataccagc ctgggcaaca tagtaagacc ctgtctctat taaaaaaaaa aaaaaaaaaa //