LOCUS BC005153 2832 bp mRNA linear HUM 08-SEP-2006
DEFINITION Homo sapiens rabphilin 3A-like (without C2 domains), mRNA (cDNA
clone MGC:3453 IMAGE:3529317), complete cds.
ACCESSION BC005153
VERSION BC005153.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2832)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2832)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (26-MAR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 11 Row: e Column: 17
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 31543557.
FEATURES Location/Qualifiers
source 1..2832
/db_xref="H-InvDB:HIT000032251"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:3453 IMAGE:3529317"
/tissue_type="Muscle, rhabdomyosarcoma"
/clone_lib="NIH_MGC_17"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2832
/gene="RPH3AL"
/gene_synonym="NOC2"
/db_xref="GeneID:9501"
/db_xref="HGNC:HGNC:10296"
/db_xref="MIM:604881"
CDS 608..1468
/gene="RPH3AL"
/gene_synonym="NOC2"
/codon_start=1
/product="RPH3AL protein"
/protein_id="AAH05153.1"
/db_xref="GeneID:9501"
/db_xref="HGNC:HGNC:10296"
/db_xref="MIM:604881"
/translation="MADTIFGSGNDQWVCPNDRQLALRAKLQTGWSVHTYQTEKQRRK
QHLSPAEVEAILQVIQRAERLDVLEQQRIGRLVERLETMRQNVMGNGLSQCLLCGEVL
GFLGSSSVFCKDCRKVWKRSGAWFYKGLPKYILPLKTPGRADDPHFRPLPTEPAEREP
RSSETSRIYTWARGRVVSSDSDSDSDLSSSSLEDRLPSTGVRDRKGDKPWKESGGSVE
APRMGFTHPPGHLSGCQSSLASGETGTGSADPPGGPRPGLTRRAPVKDTPGRAPAADA
APAGPSSCLG"
BASE COUNT 571 a 845 c 804 g 612 t
ORIGIN
1 ggcacgaggc caccactgct gcctgtaagg gctgttttgg atacagaaaa tgtgcccttt
61 ctaacccaaa aaatgcttga aatgtgtaaa agtggccaga ctaacagtcc caaagagggc
121 tgccctctaa gaggaagcgt cccaaatctg ttcagtttta gagactacgt gactggggta
181 cgtggtgggg ccttaccaga catccacgag gagaatccag gccttggttt ggctccagct
241 gggcctgcct ggtggctgcc acttattgac ttaagtccca gtgattcagc tcctcatctg
301 gaacacctcg ggtcaccccc gacaacggtg gtgggaggga gagcggcctc ctcctccctg
361 gtggggcctg tctgggtgaa gcccctctgt tcccgaggat cgtctgcctt attgaaacca
421 tctaattgga gatccgcaga ttaggctacc aagacacagc tgcctccagc agaatttgtg
481 tagtggacac ttgtacgtgc actttggaga cagcaagcat gaggcctgca gctgacagct
541 ttgagtggct gtgaacctga ctatggaaaa gatgtgactc cccaccccca gccgggtgct
601 ccgagccatg gccgacacca tcttcggcag cgggaatgat cagtgggttt gccccaatga
661 ccggcagctt gcccttcgag ccaagctgca gacgggctgg tccgtgcaca cctaccagac
721 ggagaagcag aggaggaagc agcacctcag cccggcggag gtggaggcca tcctgcaggt
781 catccagagg gcagagcggc tcgacgtcct ggagcagcag agaatcgggc ggctggtgga
841 gcggctggag accatgaggc agaatgtgat ggggaacggc ctgtcccagt gtctgctctg
901 cggggaggtg ctgggcttcc tgggcagctc gtcggtgttc tgcaaagact gcaggaaggt
961 ctggaagagg tcgggggcct ggttctacaa agggctcccc aagtatatct tgcccctgaa
1021 gacccctggc cgagctgatg acccccactt ccgacctttg cccacggaac cggcagagcg
1081 agagcccaga agctctgaga ccagccgcat ctacacgtgg gcccgaggaa gagtggtttc
1141 cagtgacagt gacagtgact cggatcttag ctcctccagc ctagaggaca gactcccatc
1201 cactggggtc agggaccgga aaggcgacaa accctggaag gagtcaggtg gcagcgtgga
1261 ggcccccagg atggggttca cccacccgcc gggccacctc tctgggtgcc agagcagcct
1321 ggccagtggt gagacgggga caggctctgc tgacccgcca gggggacccc gccccgggct
1381 gacccgaagg gccccggtaa aagacacacc tggacgagcc cccgctgctg acgcagctcc
1441 agcaggcccc tccagctgcc tgggctgagg tgtctggtgc ctggaacaga cttccctgtg
1501 gaggattcct gccagaccct gcccggctcc tccctgaccg gtccttgtgc cctcaccaga
1561 caccctgttg gccatgactc aacaaaccag tgttgggagc cgtctgcctc cccagctcag
1621 tgcctttctg caccccttct ctcctgggga gctgtctgca tccgccaccc cctccaacca
1681 ctgccctcag cccccgacct tatttattac cctcccctcc cacaccccca atctacctgg
1741 tgatgatttt aagtttgcgc gtgtcttggg ttgggctggg gggtttccca catgcagtgt
1801 cagaggggcc gcccggtggg gctatctccg ttgctatatt aatggcaaga ctaaatgaaa
1861 cctagggcac ggcctccgaa gctgcgtgtg gccccttaga ggtgagcatc agagccagag
1921 cagtgagggg gagactcacc caccctctcc ctctcccttc agctctggga ggcaggcgca
1981 gtgcccccct cccgtgggct ggcccaggac cgcgggtgaa acctgggtct gtttagtttc
2041 tttggttttt gtatgtttgt ttgtttttga cacagtctcg ctttgttgcc caggctgggg
2101 tgcagtggca cgatcgcggc tcactgcaac ctccacctcc cgggctcaag cgattctctc
2161 acctcagcct cctgagtagg tgggattaca gatgcccgcc accacaccca gttaattttt
2221 gtatttttag aagagatggg gtttctccat gttggccagg ctggtcttga actcctggtc
2281 tcaagtgatc cgcccgcctc ggcctcccaa agtgctggga ttacaggtgt gagccaccgc
2341 acccaatcct attaggtttc tttgaatccc ctcatggcct gcctggtttt tgctcagcct
2401 gtcttcagct tgaggagctg ggaagctctg gtggatgcta tgaactcact tgctgaagag
2461 cagcgttcag gtgcatcccc agccagggca cgtggctccc tcagccatga attcacttct
2521 cttcaggagg tttggcttgg catgaaaata cttcattcag agtatgggca aatgcttctg
2581 gaaaaccctt ccctgaagag agagaacgtg tgtgtgtgtg tcggtgatca caccctccca
2641 tccttcctgc ctcctgcccc aaaccccggg ttcctgggtc tggaagggcc ttctctccaa
2701 gctgggagct cctgggcccc caccattcac tttttgtcct tgctgctggc aaacagtaaa
2761 gaaactcact ttccctgtgg cacgttatgc ttcagaatta aaacaatgaa gattaaaaaa
2821 aaaaaaaaaa aa
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